RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PCDHA4Q9UN74 947 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 SMC3Q9UQE7 1217 aa16.65■□□□□ 0.26
SGCE-204ENST00000428696 LOC102724159A0A0B4J2E5 919 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 ESYT2A0FGR8 921 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 SORBS3O60504 671 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 MSCO60682 206 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 PGK1P00558 417 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 TXNP10599 105 aaKnown RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 EDNRBP24530 442 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 GJA8P48165 433 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 HMGN5P82970 282 aaKnown RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 PWP2Q15269 919 aaKnown RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 LHX8Q68G74 356 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 TAPT1Q6NXT6 567 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 MORC4Q8TE76 937 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 C8orf76Q96K31 380 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 ANO3Q9BYT9 981 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
SGCE-204ENST00000428696 MRVI1Q9Y6F6 885 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 PLXNA1Q9UIW2 1896 aa16.64■□□□□ 0.25
SGCE-204ENST00000428696 PTGS1P23219 599 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 LY6KQ17RY6 165 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 MCTP2Q6DN12 878 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 KATNBL1Q9H079 304 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 SPC25Q9HBM1 224 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 BRMS1Q9HCU9 246 aa16.63■□□□□ 0.25
SGCE-204ENST00000428696 K7ELQ4 463 aaPredicted RBP16.62■□□□□ 0.25
SGCE-204ENST00000428696 SMPD1P17405 629 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 AP3B2Q13367 1082 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 GNL2Q13823 731 aaKnown RBP16.62■□□□□ 0.25
SGCE-204ENST00000428696 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
SGCE-204ENST00000428696 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 GALNT17Q6IS24 598 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 ARRDC4Q8NCT1 418 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 PHF20Q9BVI0 1012 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 PKD2L1Q9P0L9 805 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 C6orf222P0C671 652 aaPredicted RBP16.62■□□□□ 0.25
SGCE-204ENST00000428696 GJB2P29033 226 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 KRT2P35908 639 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 CLK2P49760 499 aaKnown RBP16.62■□□□□ 0.25
SGCE-204ENST00000428696 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
SGCE-204ENST00000428696 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 KRT40Q6A162 431 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 NLRX1Q86UT6 975 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 OR6J1Q8NGC5 347 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 COPS5Q92905 334 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
SGCE-204ENST00000428696 CCDC194A0A1B0GVG4 234 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 H3BQV1 296 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 ADCY6O43306 1168 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 DUSP11O75319 330 aaKnown RBP16.61■□□□□ 0.25
SGCE-204ENST00000428696 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
SGCE-204ENST00000428696 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 IFFO2Q5TF58 517 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 XRRA1Q6P2D8 792 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 RNF180Q86T96 592 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
SGCE-204ENST00000428696 KBTBD13C9JR72 458 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 SREBF1P36956 1147 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 CHMP4BP1P59074 171 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 BEX3Q00994 111 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 MCTP1Q6DN14 999 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 TEX2Q8IWB9 1127 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
SGCE-204ENST00000428696 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 CRISPLD2Q9H0B8 497 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 OGDHLQ9ULD0 1010 aa16.6■□□□□ 0.25
SGCE-204ENST00000428696 MCM3APO60318 1980 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 RBM47A0AV96 593 aaKnown RBP16.59■□□□□ 0.25
SGCE-204ENST00000428696 BTBD18B2RXH4 712 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 STAM2O75886 525 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 RGS20O76081 388 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 ARIH2O95376 493 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 MMP1P03956 469 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 SP4Q02446 784 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 NR5A1Q13285 461 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 MTMR1Q13613 665 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 NONOQ15233 471 aaKnown RBP eCLIP16.59■□□□□ 0.25
SGCE-204ENST00000428696 DUSP28Q4G0W2 176 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 KRT25Q7Z3Z0 450 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 DIS3L2Q8IYB7 885 aaKnown RBP16.59■□□□□ 0.25
SGCE-204ENST00000428696 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
SGCE-204ENST00000428696 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 CYP2W1Q8TAV3 490 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 SNX21Q969T3 373 aa16.59■□□□□ 0.25
SGCE-204ENST00000428696 PAWRQ96IZ0 340 aaKnown RBP16.59■□□□□ 0.25
SGCE-204ENST00000428696 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms