RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 FSCN1Q16658 493 aaKnown RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 RTN1Q16799 776 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 USH1GQ495M9 461 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 CHST3Q7LGC8 479 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 CCDC12Q8WUD4 166 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 CHMP4CQ96CF2 233 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 INPP4AQ96PE3 977 aaPredicted RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 SENP7Q9BQF6 1050 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 WDR11Q9BZH6 1224 aa10.54□□□□□ -0.72
SMC1A-203ENST00000428014 RYDENQ9NUL5 291 aaKnown RBP10.54□□□□□ -0.72
SMC1A-203ENST00000428014 MEIS2O14770 477 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 KIAA0355O15063 1070 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 PGK1P00558 417 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 CFBP00751 764 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-203ENST00000428014 ADCYAP1R1P41586 468 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 AP3B2Q13367 1082 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 KCNA10Q16322 511 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 GNPTABQ3T906 1256 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 GJC2Q5T442 439 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-203ENST00000428014 ARHGEF16Q5VV41 709 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 SESTD1Q86VW0 696 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-203ENST00000428014 CUL5Q93034 780 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 JAKMIP1Q96N16 626 aaKnown RBP10.53□□□□□ -0.72
SMC1A-203ENST00000428014 RNF26Q9BY78 433 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-203ENST00000428014 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 CYP46A1Q9Y6A2 500 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 CNTNAP5Q8WYK1 1306 aa10.53□□□□□ -0.72
SMC1A-203ENST00000428014 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.72
SMC1A-203ENST00000428014 DCDC2CA8MYV0 355 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 ARVCFO00192 962 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 ADCY6O43306 1168 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 GH1P01241 217 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 ASGR1P07306 291 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 IFNAR1P17181 557 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 CCND2P30279 289 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 RTP1P59025 263 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 FGD1P98174 961 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 LAMC2Q13753 1193 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 PGM5Q15124 567 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 ANKRD1Q15327 319 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 LRIT3Q3SXY7 679 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 NFRKBQ6P4R8 1299 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 SKAP1Q86WV1 359 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 FBXO16Q8IX29 292 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-203ENST00000428014 TAAR1Q96RJ0 339 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 PSTPIP2Q9H939 334 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 FAM217BQ9NTX9 383 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-203ENST00000428014 BARHL2Q9NY43 387 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 PRKAG2Q9UGJ0 569 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 DDX41Q9UJV9 622 aaKnown RBP10.52□□□□□ -0.73
SMC1A-203ENST00000428014 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
SMC1A-203ENST00000428014 KLF18A0A0U1RQI7 1052 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 TLR3O15455 904 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PRPF3O43395 683 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PPFIA4O75335 1185 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PLEKHA8P1O95397 391 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 CD4P01730 458 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 CLTBP09497 229 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 SUPT20HL2P0C7V6 817 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 CASTP20810 708 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 METAP2P50579 478 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PURAQ00577 322 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 NEDD9Q14511 834 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PFKFB3Q16875 520 aaPredicted RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 HABP4Q5JVS0 413 aaKnown RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 GALNT17Q6IS24 598 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 PPTC7Q8NI37 304 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 GPRASP2Q96D09 838 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 ZMYND12Q9H0C1 365 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
SMC1A-203ENST00000428014 TBX21Q9UL17 535 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 DNAH12Q6ZR08 3092 aa10.51□□□□□ -0.73
SMC1A-203ENST00000428014 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-203ENST00000428014 GOLGA8AA7E2F4 631 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 GOLGA8BA8MQT2 603 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 DYNC1LI2O43237 492 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-203ENST00000428014 FIBPO43427 364 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 RGS20O76081 388 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 PARNO95453 639 aaKnown RBP10.5□□□□□ -0.73
SMC1A-203ENST00000428014 GNA11P29992 359 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms