RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 STXBP5LQ9Y2K9 1186 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
COMMD1-202ENST00000427417 BAZ2BQ9UIF8 2168 aaKnown RBP11.77□□□□□ -0.53
COMMD1-202ENST00000427417 CDH23Q9H251 3354 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 RBAK-RBAKDNI3L0D1 243 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 CASTP20810 708 aaKnown RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 CCND2P30279 289 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 LAMC2Q13753 1193 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 KRT32Q14532 448 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 PGM5Q15124 567 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 DGKDQ16760 1214 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 SKAP1Q86WV1 359 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 CUL5Q93034 780 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
COMMD1-202ENST00000427417 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 DDX41Q9UJV9 622 aaKnown RBP11.76□□□□□ -0.53
COMMD1-202ENST00000427417 TMEM265A0A087WTH1 108 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 STAM2O75886 525 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 MMP3P08254 477 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 TGFB3P10600 412 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 CCL23P55773 120 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 SLC35G1Q2M3R5 365 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 NBPF20Q3BBV1 942 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 TMEM240Q5SV17 173 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 AFG1LQ8WV93 481 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 PIBF1Q8WXW3 757 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 NOC4LQ9BVI4 516 aaKnown RBP11.75□□□□□ -0.53
COMMD1-202ENST00000427417 KATNAL1Q9BW62 490 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 IL23AQ9NPF7 189 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
COMMD1-202ENST00000427417 GRXCR1A8MXD5 290 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 NEFLP07196 543 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 PFKMP08237 780 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 FANCBQ8NB91 859 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 SMARCC2Q8TAQ2 1214 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
COMMD1-202ENST00000427417 SEMA6BQ9H3T3 888 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
COMMD1-202ENST00000427417 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
COMMD1-202ENST00000427417 SCN10AQ9Y5Y9 1956 aa11.74□□□□□ -0.53
COMMD1-202ENST00000427417 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 FGBP02675 491 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 CYP2C9P11712 490 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 PBX2P40425 430 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 BFSP2Q13515 415 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 COL9A3Q14050 684 aaPredicted RBP11.73□□□□□ -0.53
COMMD1-202ENST00000427417 FRMPD4Q14CM0 1322 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
COMMD1-202ENST00000427417 SESTD1Q86VW0 696 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 SRBD1Q8N5C6 995 aaKnown RBP11.73□□□□□ -0.53
COMMD1-202ENST00000427417 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 HERVK_113Q902F9 699 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 SCLYQ96I15 445 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 LRRC2Q9BYS8 371 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
COMMD1-202ENST00000427417 SCN5AQ14524 2016 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 KIAA1217Q5T5P2 1943 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 SORBS3O60504 671 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 RGS20O76081 388 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 PLEKHA8P1O95397 391 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 GGPS1O95749 300 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 RXRAP19793 462 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 DNAJB2P25686 324 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 RFC2P35250 354 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 CELF3Q5SZQ8 465 aaKnown RBP11.72□□□□□ -0.53
COMMD1-202ENST00000427417 RASIP1Q5U651 963 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 TMTC3Q6ZXV5 915 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
COMMD1-202ENST00000427417 SPATA33Q96N06 139 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
COMMD1-202ENST00000427417 MLXIPQ9HAP2 919 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms