RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 WDR78Q5VTH9 848 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 USP17L6PQ6QN14 398 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 NSMFQ6X4W1 530 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 MCF2L2Q86YR7 1114 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 CEP57L1Q8IYX8 460 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
ACTN4-203ENST00000424234 TNFRSF25Q93038 417 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 ZNF830Q96NB3 372 aaPredicted RBP15.97■□□□□ 0.15
ACTN4-203ENST00000424234 TRIM5Q9C035 493 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 NAT10Q9H0A0 1025 aaKnown RBP15.97■□□□□ 0.15
ACTN4-203ENST00000424234 GLT8D2Q9H1C3 349 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 CYP39A1Q9NYL5 469 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 PFASO15067 1338 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 FRMPD3Q5JV73 1810 aa15.97■□□□□ 0.15
ACTN4-203ENST00000424234 MAPK4P31152 587 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
ACTN4-203ENST00000424234 RPS6P62753 249 aaKnown RBP15.96■□□□□ 0.15
ACTN4-203ENST00000424234 NR5A1Q13285 461 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.154e-6■■■■□ 22.6
ACTN4-203ENST00000424234 RNF207Q6ZRF8 634 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 C11orf57Q6ZUT1 292 aaPredicted RBP15.96■□□□□ 0.15
ACTN4-203ENST00000424234 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 SPC24Q8NBT2 197 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 TIGD1Q96MW7 591 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 SPTLC3Q9NUV7 552 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 COL20A1Q9P218 1284 aa15.96■□□□□ 0.15
ACTN4-203ENST00000424234 BTBD18B2RXH4 712 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.14
ACTN4-203ENST00000424234 POLR2MP0CAP2 368 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 CTGFP29279 349 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 LACTBP83111 547 aaPredicted RBP15.96■□□□□ 0.14
ACTN4-203ENST00000424234 NOLC1Q14978 699 aaKnown RBP eCLIP15.96■□□□□ 0.14
ACTN4-203ENST00000424234 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.14
ACTN4-203ENST00000424234 TEX2Q8IWB9 1127 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 SAMD3Q8N6K7 520 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 MMP19Q99542 508 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 MAF1Q9H063 256 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 TMEM260Q9NX78 707 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 WBP1LQ9NX94 342 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 PCDHA6Q9UN73 950 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 R3HCC1Q9Y3T6 440 aaKnown RBP15.96■□□□□ 0.14
ACTN4-203ENST00000424234 PCDHA8Q9Y5H6 950 aa15.96■□□□□ 0.14
ACTN4-203ENST00000424234 FAM237AA0A1B0GTK4 181 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 BECN2A8MW95 431 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 ZNF202O95125 648 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 PFKFB1P16118 471 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 CAP1Q01518 475 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 BAATQ14032 418 aaPredicted RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 GRB14Q14449 540 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 PTPAQ15257 358 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 ZRSR1Q15695 479 aaKnown RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 JAKMIP3Q5VZ66 844 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 BPIFA3Q9BQP9 254 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 ARHGAP39Q9C0H5 1083 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 BIN2Q9UBW5 565 aaPredicted RBP15.95■□□□□ 0.14
ACTN4-203ENST00000424234 FRMPD4Q14CM0 1322 aa15.95■□□□□ 0.14
ACTN4-203ENST00000424234 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 GPR25O00155 361 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 CUTAO60888 179 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
ACTN4-203ENST00000424234 FCER1AP12319 257 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 SP3Q02447 781 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 AP3B2Q13367 1082 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 KCTD2Q14681 263 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 EARS2Q5JPH6 523 aaKnown RBP15.94■□□□□ 0.14
ACTN4-203ENST00000424234 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 DRC7Q8IY82 874 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 ABRAQ8N0Z2 381 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 BEGAINQ9BUH8 593 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 ANO3Q9BYT9 981 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 KCNF1Q9H3M0 494 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
ACTN4-203ENST00000424234 TSKSQ9UJT2 592 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 IVNS1ABPQ9Y6Y0 642 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 ASTN1O14525 1302 aa15.94■□□□□ 0.14
ACTN4-203ENST00000424234 DNAJC25-GNG10A0A024R161 153 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 PTPREP23469 700 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 ADORA2AP29274 412 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 NOSTRINQ8IVI9 506 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 DHX40Q8IX18 779 aaKnown RBP15.93■□□□□ 0.14
ACTN4-203ENST00000424234 FAM133AQ8N9E0 248 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 KIAA1524Q8TCG1 905 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 MRFAP1L1Q96HT8 127 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
ACTN4-203ENST00000424234 HPSEQ9Y251 543 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
ACTN4-203ENST00000424234 MYH9P35579 1960 aaKnown RBP15.93■□□□□ 0.14
ACTN4-203ENST00000424234 SPDYE3A6NKU9 549 aa15.92■□□□□ 0.14
ACTN4-203ENST00000424234 TNPO2O14787 897 aaKnown RBP15.92■□□□□ 0.14
ACTN4-203ENST00000424234 PGK2P07205 417 aa15.92■□□□□ 0.14
ACTN4-203ENST00000424234 MARCKSP29966 332 aaPredicted RBP15.92■□□□□ 0.14
ACTN4-203ENST00000424234 SYKP43405 635 aa15.92■□□□□ 0.14
ACTN4-203ENST00000424234 NLRP12P59046 1061 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms