RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 SCLYQ96I15 445 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 PDCD2LQ9BRP1 358 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 KATNAL1Q9BW62 490 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 CXXC1Q9P0U4 656 aaPredicted RBP23.65■■□□□ 1.38
MCF2L-212ENST00000420013 NOD1Q9Y239 953 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 MRVI1Q9Y6F6 885 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 MYO9BQ13459 2157 aa23.65■■□□□ 1.38
MCF2L-212ENST00000420013 CASTP20810 708 aaKnown RBP23.64■■□□□ 1.37
MCF2L-212ENST00000420013 TROAPQ12815 778 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 BFSP2Q13515 415 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 DGKDQ16760 1214 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 LY6KQ17RY6 165 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 STOX1Q6ZVD7 989 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 OTOP2Q7RTS6 562 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 CATIPQ7Z7H3 387 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 HOMER1Q86YM7 354 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 GAS2L1Q99501 681 aaPredicted RBP23.64■■□□□ 1.37
MCF2L-212ENST00000420013 MAP3K14Q99558 947 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 SLC4A7Q9Y6M7 1214 aa23.64■■□□□ 1.37
MCF2L-212ENST00000420013 TRIP12Q14669 1992 aaPredicted RBP23.63■■□□□ 1.37
MCF2L-212ENST00000420013 GRXCR1A8MXD5 290 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 ACTN1P12814 892 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 PBX2P40425 430 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 TMEM67Q5HYA8 995 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 MB21D2Q8IYB1 491 aaPredicted RBP23.63■■□□□ 1.37
MCF2L-212ENST00000420013 PPTC7Q8NI37 304 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 CAGE1Q8TC20 777 aa23.63■■□□□ 1.37
MCF2L-212ENST00000420013 DDX41Q9UJV9 622 aaKnown RBP23.63■■□□□ 1.37
MCF2L-212ENST00000420013 LAMC2Q13753 1193 aa23.62■■□□□ 1.37
MCF2L-212ENST00000420013 RETREG2Q8NC44 543 aa23.62■■□□□ 1.37
MCF2L-212ENST00000420013 VWCEQ96DN2 955 aa23.62■■□□□ 1.37
MCF2L-212ENST00000420013 RBM8AQ9Y5S9 174 aaKnown RBP23.62■■□□□ 1.37
MCF2L-212ENST00000420013 FRMPD4Q14CM0 1322 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 PNMA6FA0A0J9YX94 578 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 ZBBXA8MT70 800 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 GCOM1H8Y6P7 765 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-212ENST00000420013 DDAH1O94760 285 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 F2P00734 622 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 POLR2MP0CAP2 368 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 HOXD8P13378 290 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-212ENST00000420013 RBL2Q08999 1139 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 PGM5Q15124 567 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 SLC35G1Q2M3R5 365 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 AFAP1L1Q8TED9 768 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 PIGSQ96S52 555 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
MCF2L-212ENST00000420013 CHD7Q9P2D1 2997 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 CYTH3O43739 400 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 TGFB3P10600 412 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 CCND2P30279 289 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 KIF5BP33176 963 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 ANTXR2P58335 489 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 CHST3Q7LGC8 479 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 KAT2BQ92831 832 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 SLC9A7Q96T83 725 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 SPZ1Q9BXG8 430 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 SLC28A3Q9HAS3 691 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 PCDHA11Q9Y5I1 949 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 TET1Q8NFU7 2136 aa23.6■■□□□ 1.37
MCF2L-212ENST00000420013 PARNO95453 639 aaKnown RBP23.59■■□□□ 1.37
MCF2L-212ENST00000420013 IQCF3P0C7M6 154 aa23.59■■□□□ 1.37
MCF2L-212ENST00000420013 ATP2A2P16615 1042 aaKnown RBP23.59■■□□□ 1.37
MCF2L-212ENST00000420013 PTGISQ16647 500 aa23.59■■□□□ 1.37
MCF2L-212ENST00000420013 CASC1Q6TDU7 716 aa23.59■■□□□ 1.37
MCF2L-212ENST00000420013 VSIG10LQ86VR7 867 aa23.59■■□□□ 1.37
MCF2L-212ENST00000420013 DHX37Q8IY37 1157 aaKnown RBP23.59■■□□□ 1.37
MCF2L-212ENST00000420013 CTCFLQ8NI51 663 aaPredicted RBP23.59■■□□□ 1.37
MCF2L-212ENST00000420013 GTF2IRD1Q9UHL9 959 aa23.59■■□□□ 1.37
MCF2L-212ENST00000420013 STAM2O75886 525 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 BAIAP3O94812 1187 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 MYCLP12524 364 aaPredicted RBP23.58■■□□□ 1.37
MCF2L-212ENST00000420013 HOXA13P31271 388 aaPredicted RBP23.58■■□□□ 1.37
MCF2L-212ENST00000420013 DEFB128Q7Z7B8 93 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 ZNF654Q8IZM8 581 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 IGDCC4Q8TDY8 1250 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 TMEM87BQ96K49 555 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 COL25A1Q9BXS0 654 aaPredicted RBP23.58■■□□□ 1.37
MCF2L-212ENST00000420013 NKX2-4Q9H2Z4 354 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 LY9Q9HBG7 655 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 SENP2Q9HC62 589 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 PTPRSQ13332 1948 aa23.58■■□□□ 1.37
MCF2L-212ENST00000420013 HAS3O00219 553 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 RGS20O76081 388 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 SMARCA1P28370 1054 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 PSEN2P49810 448 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 GNPTABQ3T906 1256 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 GDF6Q6KF10 455 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-212ENST00000420013 IL31RAQ8NI17 732 aa23.57■■□□□ 1.36
MCF2L-212ENST00000420013 YBX2Q9Y2T7 364 aaKnown RBP23.57■■□□□ 1.36
MCF2L-212ENST00000420013 UBA1P22314 1058 aaKnown RBP23.56■■□□□ 1.36
MCF2L-212ENST00000420013 MCM5P33992 734 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 GNAQP50148 359 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 CHMP4BP1P59074 171 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 MFSD10Q14728 455 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 CELF3Q5SZQ8 465 aaKnown RBP23.56■■□□□ 1.36
MCF2L-212ENST00000420013 MYSM1Q5VVJ2 828 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 PPP2R2DQ66LE6 453 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 TMTC2Q8N394 836 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 C7orf31Q8N865 590 aa23.56■■□□□ 1.36
MCF2L-212ENST00000420013 PHOSPHO2Q8TCD6 241 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms