RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 MTRQ99707 1265 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 FAM96AQ9H5X1 160 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 PGRMC1O00264 195 aaKnown RBP11.15□□□□□ -0.62
SATB1-204ENST00000417717 POLR2DO15514 142 aaKnown RBP11.15□□□□□ -0.62
SATB1-204ENST00000417717 FAM107AO95990 144 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 RRS1Q15050 365 aaKnown RBP11.15□□□□□ -0.62
SATB1-204ENST00000417717 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 MCRS1Q96EZ8 462 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
SATB1-204ENST00000417717 KRT38O76015 456 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 MSL3P1P0C860 447 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 ATP8B2P98198 1209 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 RABGAP1LQ5R372 815 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 RGS9BPQ6ZS82 235 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 RRAGAQ7L523 313 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 CDH24Q86UP0 819 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 FAM161BQ96MY7 647 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 PANX2Q96RD6 677 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 GOLGA8CPA6NN73 597 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 KCNJ6P48051 423 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.63
SATB1-204ENST00000417717 CNGA3Q16281 694 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 PATL1Q86TB9 770 aaKnown RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 AGTPBP1Q9UPW5 1226 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 SMAPO00193 183 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 KRT79Q5XKE5 535 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 DTHD1Q6ZMT9 781 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 ZMYND12Q9H0C1 365 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 PFKFB2O60825 505 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 ATF2P15336 505 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 C4BPBP20851 252 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 NR1H3Q13133 447 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 WTAPQ15007 396 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 IQCB1Q15051 598 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 CNNM2Q9H8M5 875 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 EURLQ9NYK6 297 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 NPATQ14207 1427 aa11.14□□□□□ -0.63
SATB1-204ENST00000417717 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
SATB1-204ENST00000417717 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 GRIN1Q05586 938 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 ART3Q13508 389 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 DCTN2Q13561 401 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 EZH1Q92800 747 aaPredicted RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 ZFYVE19Q96K21 471 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 IMPG2Q9BZV3 1241 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 SNX25Q9H3E2 840 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 RSPH10B2B2RC85 870 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CCDC188H7C350 402 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 RSPH10BP0C881 870 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 GPTP24298 496 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CASP14P31944 242 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 TRMT10CQ7L0Y3 403 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 HNRNPLLQ8WVV9 542 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 PBKQ96KB5 322 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 DACH2Q96NX9 599 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 NFU1Q9UMS0 254 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 IPO5O00410 1097 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 GNGT2O14610 69 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 SERPINB2P05120 415 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 MYBL2P10244 700 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 CA4P22748 312 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 LSP1P33241 339 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 USP14P54578 494 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 NUP107P57740 925 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 MAGOHP61326 146 aaKnown RBP11.13□□□□□ -0.63
SATB1-204ENST00000417717 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 LIN9Q5TKA1 542 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 TUBA3EQ6PEY2 450 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 STKLD1Q8NE28 680 aa11.13□□□□□ -0.63
SATB1-204ENST00000417717 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms