RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 A0A1W2PQJ5 194 aa16.08■□□□□ 0.17
HDAC9-208ENST00000417496 PPP1R11O60927 126 aaPredicted RBP16.08■□□□□ 0.17
HDAC9-208ENST00000417496 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.17
HDAC9-208ENST00000417496 TMC4Q7Z404 712 aa16.08■□□□□ 0.17
HDAC9-208ENST00000417496 FAM71BQ8TC56 605 aa16.08■□□□□ 0.17
HDAC9-208ENST00000417496 TULP2O00295 520 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 TUBBP07437 444 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 FIGNQ5HY92 759 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 RAD54LQ92698 747 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 LRRC1Q9BTT6 524 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 DMGDHQ9UI17 866 aaKnown RBP16.08■□□□□ 0.16
HDAC9-208ENST00000417496 SNX12Q9UMY4 172 aa16.08■□□□□ 0.16
HDAC9-208ENST00000417496 BUB1O43683 1085 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 GGCXP38435 758 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 DNA2P51530 1060 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 CKAP4Q07065 602 aaKnown RBP16.07■□□□□ 0.16
HDAC9-208ENST00000417496 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 CCNI2Q6ZMN8 369 aaPredicted RBP16.07■□□□□ 0.16
HDAC9-208ENST00000417496 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 MXD3Q9BW11 206 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 GGA1Q9UJY5 639 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 RGL2O15211 777 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 RAD21O60216 631 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC9-208ENST00000417496 GTF2IP78347 998 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 CDK17Q00537 523 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 RASSF7Q02833 373 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 MAN2A1Q16706 1144 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 MSL3Q8N5Y2 521 aaKnown RBP16.07■□□□□ 0.16
HDAC9-208ENST00000417496 HAS1Q92839 578 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
HDAC9-208ENST00000417496 MAST2Q6P0Q8 1798 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 ANO9A1A5B4 782 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 TRIM66O15016 1216 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 KCNMA1Q12791 1236 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 GUF1Q8N442 669 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 BAP1Q92560 729 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 USO1O60763 962 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 IL1R1P14778 569 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 HNRNPH3P31942 346 aaKnown RBP16.06■□□□□ 0.16
HDAC9-208ENST00000417496 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 TRIM58Q8NG06 486 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 DAGLAQ9Y4D2 1042 aa16.06■□□□□ 0.16
HDAC9-208ENST00000417496 ESYT2A0FGR8 921 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 MARCH6O60337 910 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 TACC1O75410 805 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 SLC1A4P43007 532 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 MAGEA1P43355 309 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 NT5C2P49902 561 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 ARID5AQ03989 594 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
HDAC9-208ENST00000417496 TARSL2A2RTX5 802 aaKnown RBP16.05■□□□□ 0.16
HDAC9-208ENST00000417496 ANKRD65E5RJM6 399 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 E9PMD0 336 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 AGPSO00116 658 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 TRAF5O00463 557 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 PPP1R2P41236 205 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
HDAC9-208ENST00000417496 COBLL1Q53SF7 1204 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 SPATA4Q8NEY3 305 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 TSGA10Q9BZW7 698 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L10C9JJH3 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 PRPF6O94906 941 aaKnown RBP16.04■□□□□ 0.16
HDAC9-208ENST00000417496 MAP9Q49MG5 647 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 TDRD12Q587J7 1177 aaKnown RBP16.04■□□□□ 0.16
HDAC9-208ENST00000417496 CCDC84Q86UT8 332 aaPredicted RBP16.04■□□□□ 0.16
HDAC9-208ENST00000417496 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 DNAJC19Q96DA6 116 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 LRRC4BQ9NT99 713 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 MYH1P12882 1939 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 NAV1Q8NEY1 1877 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L15C9J2P7 530 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms