RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RFX8Q6ZV50 586 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 TSC22D3Q99576 134 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 HDAC6Q9UBN7 1215 aa13.09□□□□□ -0.31
UBR4-205ENST00000417040 ESYT2A0FGR8 921 aa13.08□□□□□ -0.31
UBR4-205ENST00000417040 PRKAB2O43741 272 aa13.08□□□□□ -0.31
UBR4-205ENST00000417040 TADA3O75528 432 aa13.08□□□□□ -0.31
UBR4-205ENST00000417040 PHKA1P46020 1223 aa13.08□□□□□ -0.31
UBR4-205ENST00000417040 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.31
UBR4-205ENST00000417040 RIOK1Q9BRS2 568 aaKnown RBP13.08□□□□□ -0.31
UBR4-205ENST00000417040 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.31
UBR4-205ENST00000417040 AFPP02771 609 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 LMNB1P20700 586 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 CUL4AQ13619 759 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ZC3H18Q86VM9 953 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 TRIM56Q9BRZ2 755 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 DISC1Q9NRI5 854 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 NCK2O43639 380 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ZBED4O75132 1171 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 KIF11P52732 1056 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ARHGAP4P98171 946 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 DR1Q01658 176 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 GABPB2Q8TAK5 448 aaPredicted RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 KITP10721 976 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 STMN1P16949 149 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 ANKRD20A4Q4UJ75 823 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ANKRD20A2Q5SQ80 823 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ANKRD20A1Q5TYW2 823 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 NUGGCQ68CJ6 796 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 GSDMAQ96QA5 445 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 ACTR5Q9H9F9 607 aaPredicted RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 GPHNQ9NQX3 736 aaPredicted RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 GTF2IP78347 998 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 UBE2TQ9NPD8 197 aaPredicted RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 RWDD2AQ9UIY3 292 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 INPP5FQ9Y2H2 1132 aa13.08□□□□□ -0.32
UBR4-205ENST00000417040 SOS2Q07890 1332 aaPredicted RBP13.08□□□□□ -0.32
UBR4-205ENST00000417040 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 SIRT2Q8IXJ6 389 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 PCDHA4Q9UN74 947 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 HOXB7P09629 217 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 KCNA6P17658 529 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 PPP2R5EQ16537 467 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 C10orf76Q5T2E6 689 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 ALS2CLQ60I27 953 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 ICE2Q659A1 982 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 MLXIPQ9HAP2 919 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 TXLNGQ9NUQ3 528 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 EEF1B2P24534 225 aaKnown RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 KRT31Q15323 416 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 SLFN12Q8IYM2 578 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.326e-11■■■■■ 61.2
UBR4-205ENST00000417040 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 TRIM49BA6NDI0 452 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 CAPN9O14815 690 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 PPP1R12AO14974 1030 aaPredicted RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 KRT1P04264 644 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 INPP1P49441 399 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 PALMO75781 387 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 MMP1P03956 469 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 MMEP08473 750 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 ALAS1P13196 640 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 SLC16A2P36021 539 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 GARSP41250 739 aaKnown RBP13.07□□□□□ -0.32
UBR4-205ENST00000417040 TMEM259Q4ZIN3 620 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 NLRX1Q86UT6 975 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 TEKT1Q969V4 418 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 GREM2Q9H772 168 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 BABAM1Q9NWV8 329 aa13.07□□□□□ -0.32
UBR4-205ENST00000417040 GOLGA8SH3BPF8 625 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 BBOF1Q8ND07 529 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 JDP2Q8WYK2 163 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 SPZ1Q9BXG8 430 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 PUS7LQ9H0K6 701 aaKnown RBP13.06□□□□□ -0.32
UBR4-205ENST00000417040 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 MAST3O60307 1309 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 GNGT2O14610 69 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 DDAH1O94760 285 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms