RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 ACTN1P12814 892 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 WDR5P61964 334 aaKnown RBP15.11■□□□□ 0.01
LINC00339-202ENST00000416769 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-202ENST00000416769 CD320Q9NPF0 282 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 NOD1Q9Y239 953 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
LINC00339-202ENST00000416769 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00339-202ENST00000416769 TLL1O43897 1013 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 EIF2AK2P19525 551 aaKnown RBP15.1■□□□□ 0.01
LINC00339-202ENST00000416769 POU3F3P20264 500 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-202ENST00000416769 RFC2P35250 354 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 MBTPS1Q14703 1052 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
LINC00339-202ENST00000416769 FAM117BQ6P1L5 589 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 RAD50Q92878 1312 aa15.1■□□□□ 0.01
LINC00339-202ENST00000416769 OPLAHO14841 1288 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-202ENST00000416769 KDM4AO75164 1064 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 PDE4AP27815 886 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 BFSP2Q13515 415 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 LRRC8DQ7L1W4 858 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 PLEKHM2Q8IWE5 1019 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-202ENST00000416769 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
LINC00339-202ENST00000416769 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
LINC00339-202ENST00000416769 FAM86C2PA6NEL3 165 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 B4E1Z4 1266 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0
LINC00339-202ENST00000416769 GH1P01241 217 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 CKBP12277 381 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 PTPN11Q06124 597 aaPredicted RBP15.08■□□□□ 0
LINC00339-202ENST00000416769 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
LINC00339-202ENST00000416769 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
LINC00339-202ENST00000416769 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
LINC00339-202ENST00000416769 PNMA1Q8ND90 353 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 IL31RAQ8NI17 732 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
LINC00339-202ENST00000416769 IL25Q9H293 177 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 OSBPL3Q9H4L5 887 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 C11orf16Q9NQ32 467 aa15.08■□□□□ 0
LINC00339-202ENST00000416769 KPNA6O60684 536 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 RGS20O76081 388 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 SELPP16109 830 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 PLA2G5P39877 138 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 KCNJ6P48051 423 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 PSEN2P49810 448 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00339-202ENST00000416769 SESTD1Q86VW0 696 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
LINC00339-202ENST00000416769 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 TTC14Q96N46 770 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 RMDN3Q96TC7 470 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 SUGCTQ9HAC7 445 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
LINC00339-202ENST00000416769 SIP14410 1827 aa15.07■□□□□ 0
LINC00339-202ENST00000416769 LINC01553A4QN01 128 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 BAIAP3O94812 1187 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 SDSP20132 328 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
LINC00339-202ENST00000416769 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 RGS22Q8NE09 1264 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 CAGE1Q8TC20 777 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 ESR2Q92731 530 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 HLA-CQ95604 372 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 ABCB11O95342 1321 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 DOCK5Q9H7D0 1870 aa15.06■□□□□ 0
LINC00339-202ENST00000416769 MICAL3Q7RTP6 2002 aa15.05■□□□□ 0
LINC00339-202ENST00000416769 KIF28PB7ZC32 967 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
LINC00339-202ENST00000416769 CXCL10P02778 98 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 HOXA13P31271 388 aaPredicted RBP15.05■□□□□ -0
LINC00339-202ENST00000416769 SP2Q02086 613 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 RBL2Q08999 1139 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 MFSD10Q14728 455 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 KIAA0753Q2KHM9 967 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 CNKSR3Q6P9H4 555 aa15.05■□□□□ -0
LINC00339-202ENST00000416769 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms