RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 STOX1Q6ZVD7 989 aa21.29■■□□□ 1
SMIM19-202ENST00000416469 CHST3Q7LGC8 479 aa21.29■■□□□ 1
SMIM19-202ENST00000416469 HOMER1Q86YM7 354 aa21.29■■□□□ 1
SMIM19-202ENST00000416469 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
SMIM19-202ENST00000416469 RIOX1Q9H6W3 641 aa21.29■■□□□ 1
SMIM19-202ENST00000416469 DDX41Q9UJV9 622 aaKnown RBP21.29■■□□□ 1
SMIM19-202ENST00000416469 PITPNM1O00562 1244 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 RFC2P35250 354 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 CHMP4BP1P59074 171 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 TRAF1Q13077 416 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 DEFB128Q7Z7B8 93 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 PIGSQ96S52 555 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 PDCD2LQ9BRP1 358 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 COL25A1Q9BXS0 654 aaPredicted RBP21.28■■□□□ 1
SMIM19-202ENST00000416469 NKX2-4Q9H2Z4 354 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 NOD1Q9Y239 953 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 MRVI1Q9Y6F6 885 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 SLC4A7Q9Y6M7 1214 aa21.28■■□□□ 1
SMIM19-202ENST00000416469 ZBBXA8MT70 800 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
SMIM19-202ENST00000416469 TROAPQ12815 778 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 BFSP2Q13515 415 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 RETREG2Q8NC44 543 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 TET1Q8NFU7 2136 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 KAT2BQ92831 832 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 MAP4K1Q92918 833 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 EMID1Q96A84 441 aaPredicted RBP21.27■■□□□ 1
SMIM19-202ENST00000416469 GAS2L1Q99501 681 aaPredicted RBP21.27■■□□□ 1
SMIM19-202ENST00000416469 PRDM12Q9H4Q4 367 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 YBX2Q9Y2T7 364 aaKnown RBP21.27■■□□□ 1
SMIM19-202ENST00000416469 CHD9Q3L8U1 2897 aa21.27■■□□□ 1
SMIM19-202ENST00000416469 HOXA13P31271 388 aaPredicted RBP21.26■□□□□ 0.99
SMIM19-202ENST00000416469 ANTXR2P58335 489 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 PTGISQ16647 500 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 DGKDQ16760 1214 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 TMEM67Q5HYA8 995 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 SESTD1Q86VW0 696 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 MB21D2Q8IYB1 491 aaPredicted RBP21.26■□□□□ 0.99
SMIM19-202ENST00000416469 SLC28A3Q9HAS3 691 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 RBM8AQ9Y5S9 174 aaKnown RBP21.26■□□□□ 0.99
SMIM19-202ENST00000416469 PRUNE2Q8WUY3 3088 aa21.26■□□□□ 0.99
SMIM19-202ENST00000416469 CYTH3O43739 400 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 RGS20O76081 388 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 IQCF3P0C7M6 154 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 MYCLP12524 364 aaPredicted RBP21.25■□□□□ 0.99
SMIM19-202ENST00000416469 RABGGTBP53611 331 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 LAMC2Q13753 1193 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 PGM5Q15124 567 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 CATIPQ7Z7H3 387 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 VSIG10LQ86VR7 867 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 DHX37Q8IY37 1157 aaKnown RBP21.25■□□□□ 0.99
SMIM19-202ENST00000416469 PPTC7Q8NI37 304 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 IGDCC4Q8TDY8 1250 aa21.25■□□□□ 0.99
SMIM19-202ENST00000416469 PNMA6FA0A0J9YX94 578 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 GCOM1H8Y6P7 765 aaPredicted RBP21.24■□□□□ 0.99
SMIM19-202ENST00000416469 POLR2MP0CAP2 368 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 ACTN1P12814 892 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 ATP2A2P16615 1042 aaKnown RBP21.24■□□□□ 0.99
SMIM19-202ENST00000416469 GDF6Q6KF10 455 aaPredicted RBP21.24■□□□□ 0.99
SMIM19-202ENST00000416469 KCNV1Q6PIU1 500 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 CCDC155Q8N6L0 562 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 USP38Q8NB14 1042 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 IL31RAQ8NI17 732 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 CTAGE1Q96RT6 745 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 PCDHA11Q9Y5I1 949 aa21.24■□□□□ 0.99
SMIM19-202ENST00000416469 CAGE1Q8TC20 777 aa21.23■□□□□ 0.99
SMIM19-202ENST00000416469 KATNAL1Q9BW62 490 aa21.23■□□□□ 0.99
SMIM19-202ENST00000416469 PTPRSQ13332 1948 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 F2P00734 622 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
SMIM19-202ENST00000416469 MYOGP15173 224 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 CCND2P30279 289 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 PSEN2P49810 448 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 FCHSD1Q86WN1 690 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 C7orf31Q8N865 590 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 AFAP1L1Q8TED9 768 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 ALG1Q9BT22 464 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 FTOQ9C0B1 505 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMIM19-202ENST00000416469 LY9Q9HBG7 655 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 HDAC6Q9UBN7 1215 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 GTF2IRD1Q9UHL9 959 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 DOCK5Q9H7D0 1870 aa21.22■□□□□ 0.99
SMIM19-202ENST00000416469 ZNF286BP0CG31 522 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 ADGRE1Q14246 886 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 MFSD10Q14728 455 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 CELF3Q5SZQ8 465 aaKnown RBP21.21■□□□□ 0.99
SMIM19-202ENST00000416469 MYSM1Q5VVJ2 828 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 PPP2R2DQ66LE6 453 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 ZNF654Q8IZM8 581 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 DHX38Q92620 1227 aaKnown RBP21.21■□□□□ 0.99
SMIM19-202ENST00000416469 MAP3K14Q99558 947 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 MTA3Q9BTC8 594 aa21.21■□□□□ 0.99
SMIM19-202ENST00000416469 HAS3O00219 553 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 DDAH1O94760 285 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 GGPS1O95749 300 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 TGFB3P10600 412 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 UBA1P22314 1058 aaKnown RBP21.2■□□□□ 0.98
SMIM19-202ENST00000416469 KIAA0753Q2KHM9 967 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 CASC1Q6TDU7 716 aa21.2■□□□□ 0.98
SMIM19-202ENST00000416469 CTCFLQ8NI51 663 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms