RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 RYBPQ8N488 228 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
COL12A1-203ENST00000416123 MMP1P03956 469 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 SNX1Q13596 522 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
COL12A1-203ENST00000416123 NDUFAB1O14561 156 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 AFAP1L2Q8N4X5 818 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 DCLK2Q8N568 766 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 CYP27B1O15528 508 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 FOSP01100 380 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 SRGAP1Q7Z6B7 1085 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 RTKN2Q8IZC4 609 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 ATP6V0A1Q93050 837 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 SPATA31A3Q5VYP0 1347 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 A6NJR5 290 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 SGK1O00141 431 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 RBM6P78332 1123 aaKnown RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 ERCC6LQ2NKX8 1250 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 SPATA1Q5VX52 437 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 CCDC13Q8IYE1 715 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 H7C0C1 242 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 KCNQ2O43526 872 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 ATP5OP48047 213 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 ATP11AP98196 1134 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 EN1Q05925 392 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 KRT71Q3SY84 523 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 FAM83BQ5T0W9 1011 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 PDXDC2PQ6P474 469 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 ZSCAN20P17040 1043 aaPredicted RBP11.6□□□□□ -0.55
COL12A1-203ENST00000416123 TRIM58Q8NG06 486 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 COL15A1P39059 1388 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 GOLGA8IPA6NC78 632 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 GOLGA8JA6NMD2 632 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 H0YCG3 227 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 CD58P19256 250 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 PLCB1Q9NQ66 1216 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 OGFRQ9NZT2 677 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 MINPP1Q9UNW1 487 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 PPP2R2CQ9Y2T4 447 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 PCDHB6Q9Y5E3 794 aa11.6□□□□□ -0.55
COL12A1-203ENST00000416123 PSMC2P35998 433 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TUBB2AQ13885 445 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PIGOQ8TEQ8 1089 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TUBB2BQ9BVA1 445 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PLCG1P19174 1290 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RNF123Q5XPI4 1314 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 ENC1O14682 589 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 LARGE1O95461 756 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PRDX5P30044 214 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TMC4Q7Z404 712 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RSPH3Q86UC2 560 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TUBBP07437 444 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 DYNLT1P63172 113 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PTK2Q05397 1052 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PPP2R5AQ15172 486 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 ATP2A3Q93084 1043 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 PRKAG2Q9UGJ0 569 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RNF17Q9BXT8 1623 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 GOLGA8SH3BPF8 625 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 EHHADHQ08426 723 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 NAA25Q14CX7 972 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 CASP14P31944 242 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 CXCR5P32302 372 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 TTC31Q49AM3 519 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 KIAA1841Q6NSI8 718 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 UBE2TQ9NPD8 197 aaPredicted RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 GCNT4Q9P109 453 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 CTNNA1P35221 906 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 RINT1Q6NUQ1 792 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 MAIP1Q8WWC4 291 aa11.59□□□□□ -0.55
COL12A1-203ENST00000416123 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
COL12A1-203ENST00000416123 NSFP46459 744 aaKnown RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RSRC2Q7L4I2 434 aaKnown RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
COL12A1-203ENST00000416123 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-203ENST00000416123 RAVER2Q9HCJ3 691 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms