RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 MSL3Q8N5Y2 521 aaKnown RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 LENG1Q96BZ8 264 aaPredicted RBP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 ZNF333Q96JL9 665 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 IWS1Q96ST2 819 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 MCM3APO60318 1980 aa11.92□□□□□ -0.5
HLA-DMB-257ENST00000414017 RPTORQ8N122 1335 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCDC85CA6NKD9 419 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 BTBD18B2RXH4 712 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 ZNF865P0CJ78 1059 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 CYBAP13498 195 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 ATP2B1P20020 1258 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 INF2Q27J81 1249 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 MCTP2Q6DN12 878 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 KRT25Q7Z3Z0 450 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 DEFB118Q96PH6 123 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 VTA1Q9NP79 307 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 DAXXQ9UER7 740 aaPredicted RBP11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 FAM184BQ9ULE4 1060 aa11.91□□□□□ -0.5
HLA-DMB-257ENST00000414017 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 EIF3JO75822 258 aaKnown RBP11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 AKR1A1P14550 325 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 PTGS1P23219 599 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 EDNRBP24530 442 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 ARHGAP4P98171 946 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 NPY5RQ15761 445 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 PCNX4Q63HM2 1172 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 VSIG10LQ86VR7 867 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 FBXO18Q8NFZ0 1043 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 WDR11Q9BZH6 1224 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 MRVI1Q9Y6F6 885 aa11.9□□□□□ -0.5
HLA-DMB-257ENST00000414017 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 SEPT4O43236 478 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TXNP10599 105 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 RARBP10826 455 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 SREBF1P36956 1147 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 MRPS9P82933 396 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TNFAIP2Q03169 654 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TTLL4Q14679 1199 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 LETM2Q2VYF4 491 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 EARS2Q5JPH6 523 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 TAPT1Q6NXT6 567 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 NLRX1Q86UT6 975 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 SCFD2Q8WU76 684 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 COPS5Q92905 334 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 KATNBL1Q9H079 304 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
HLA-DMB-257ENST00000414017 FRMPD4Q14CM0 1322 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 KIF28PB7ZC32 967 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 M0R2N6 131 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 ARIH2O95376 493 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 IGHA2P01877 340 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 SMPD1P17405 629 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 PDCP20941 246 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 SOX10P56693 466 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 SP4Q02446 784 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 PRR16Q569H4 304 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 CYP2W1Q8TAV3 490 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 MXRA8Q9BRK3 442 aa11.88□□□□□ -0.51
HLA-DMB-257ENST00000414017 LRRC37A2A6NM11 1700 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 ADCY6O43306 1168 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 STAM2O75886 525 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 RGS20O76081 388 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 TDP2O95551 362 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 PGK1P00558 417 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 ITGB5P18084 799 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 SYT1P21579 422 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 MTMR1Q13613 665 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 IQSEC1Q6DN90 963 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 NEK8Q86SG6 692 aa11.87□□□□□ -0.51
HLA-DMB-257ENST00000414017 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms