RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 DDX41Q9UJV9 622 aaKnown RBP22.38■■□□□ 1.17
CPSF7-204ENST00000413232 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 GH1P01241 217 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 NR3C2P08235 984 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 GHRHRQ02643 423 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 MSRAQ9UJ68 235 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 DOCK5Q9H7D0 1870 aa22.37■■□□□ 1.17
CPSF7-204ENST00000413232 ZBTB5O15062 677 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 CYTH3O43739 400 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 RGS20O76081 388 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 IQCF3P0C7M6 154 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 GRM4Q14833 912 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 RAB30Q15771 203 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 MTIF3Q9H2K0 278 aaKnown RBP22.36■■□□□ 1.17
CPSF7-204ENST00000413232 SLC4A7Q9Y6M7 1214 aa22.36■■□□□ 1.17
CPSF7-204ENST00000413232 ZBBXA8MT70 800 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 E7EWF7 191 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 SGSM2O43147 1006 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 EIF3JO75822 258 aaKnown RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 PTPN11Q06124 597 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 GDF6Q6KF10 455 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 IL31RAQ8NI17 732 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 ZFP91Q96JP5 570 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 PIGSQ96S52 555 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 RIOX1Q9H6W3 641 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 PCDHA1Q9Y5I3 950 aa22.35■■□□□ 1.17
CPSF7-204ENST00000413232 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-204ENST00000413232 IFIT3O14879 490 aaKnown RBP22.34■■□□□ 1.17
CPSF7-204ENST00000413232 ANTXR2P58335 489 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 TROAPQ12815 778 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 TRDNQ13061 729 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 GPNMBQ14956 572 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 HOMER1Q86YM7 354 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 RUFY2Q8WXA3 655 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 PDCD2LQ9BRP1 358 aa22.34■■□□□ 1.17
CPSF7-204ENST00000413232 PRRC2BQ5JSZ5 2229 aaKnown RBP22.33■■□□□ 1.17
CPSF7-204ENST00000413232 TRANK1O15050 2925 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 PITPNM1O00562 1244 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 COL9A3Q14050 684 aaPredicted RBP22.33■■□□□ 1.17
CPSF7-204ENST00000413232 PTGISQ16647 500 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 PPM1EQ8WY54 764 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 DHX38Q92620 1227 aaKnown RBP22.33■■□□□ 1.17
CPSF7-204ENST00000413232 GAS2L1Q99501 681 aaPredicted RBP22.33■■□□□ 1.17
CPSF7-204ENST00000413232 SLC28A3Q9HAS3 691 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 MRVI1Q9Y6F6 885 aa22.33■■□□□ 1.17
CPSF7-204ENST00000413232 SORBS3O60504 671 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 PFKMP08237 780 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 MYCLP12524 364 aaPredicted RBP22.32■■□□□ 1.16
CPSF7-204ENST00000413232 ATP2A2P16615 1042 aaKnown RBP22.32■■□□□ 1.16
CPSF7-204ENST00000413232 SP2Q02086 613 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 SESTD1Q86VW0 696 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 IGDCC4Q8TDY8 1250 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 GPKOWQ92917 476 aaPredicted RBP eCLIP22.32■■□□□ 1.163e-7■■■■□ 21.6
CPSF7-204ENST00000413232 MAP4K1Q92918 833 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 EMID1Q96A84 441 aaPredicted RBP22.32■■□□□ 1.16
CPSF7-204ENST00000413232 MUC3AQ02505 3323 aa22.32■■□□□ 1.16
CPSF7-204ENST00000413232 CASTP20810 708 aaKnown RBP22.31■■□□□ 1.16
CPSF7-204ENST00000413232 PGM5Q15124 567 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 DGKDQ16760 1214 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 VSIG10LQ86VR7 867 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 RETREG2Q8NC44 543 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 NCOA7Q8NI08 942 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 BCAS3Q9H6U6 928 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 HDAC6Q9UBN7 1215 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 PCDHA11Q9Y5I1 949 aa22.31■■□□□ 1.16
CPSF7-204ENST00000413232 ZNF286BP0CG31 522 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 RFC2P35250 354 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 BFSP2Q13515 415 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 HIC1Q14526 733 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 WTAPQ15007 396 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 MYSM1Q5VVJ2 828 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 MB21D2Q8IYB1 491 aaPredicted RBP22.3■■□□□ 1.16
CPSF7-204ENST00000413232 ALG1Q9BT22 464 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 MAP3K20Q9NYL2 800 aaKnown RBP22.3■■□□□ 1.16
CPSF7-204ENST00000413232 GTF2IRD1Q9UHL9 959 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 NOD1Q9Y239 953 aa22.3■■□□□ 1.16
CPSF7-204ENST00000413232 HAS3O00219 553 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 ARHGEF15O94989 841 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 IGFBP4P22692 258 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 PSEN2P49810 448 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 LAMC2Q13753 1193 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 CCDC85BQ15834 202 aaPredicted RBP22.29■■□□□ 1.16
CPSF7-204ENST00000413232 HSDL1Q3SXM5 330 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 PPP2R2DQ66LE6 453 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 RALYLQ86SE5 291 aaKnown RBP22.29■■□□□ 1.16
CPSF7-204ENST00000413232 FCHSD1Q86WN1 690 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 DHX37Q8IY37 1157 aaKnown RBP22.29■■□□□ 1.16
CPSF7-204ENST00000413232 PPTC7Q8NI37 304 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 PIBF1Q8WXW3 757 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 WNT8BQ93098 351 aa22.29■■□□□ 1.16
CPSF7-204ENST00000413232 RBM8AQ9Y5S9 174 aaKnown RBP22.29■■□□□ 1.16
CPSF7-204ENST00000413232 PNMA6FA0A0J9YX94 578 aa22.28■■□□□ 1.16
CPSF7-204ENST00000413232 F2P00734 622 aa22.28■■□□□ 1.16
CPSF7-204ENST00000413232 HOXD8P13378 290 aaPredicted RBP22.28■■□□□ 1.16
CPSF7-204ENST00000413232 ZNF200P98182 395 aaPredicted RBP22.28■■□□□ 1.16
CPSF7-204ENST00000413232 TCTN1Q2MV58 587 aa22.28■■□□□ 1.16
CPSF7-204ENST00000413232 TMEM67Q5HYA8 995 aa22.28■■□□□ 1.16
CPSF7-204ENST00000413232 CELF3Q5SZQ8 465 aaKnown RBP22.28■■□□□ 1.16
CPSF7-204ENST00000413232 MYL10Q9BUA6 226 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms