RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 TEX2Q8IWB9 1127 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
CPNE1-206ENST00000412056 WASF1Q92558 559 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 KCNJ14Q9UNX9 436 aa15.98■□□□□ 0.15
CPNE1-206ENST00000412056 RGS20O76081 388 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 FOSP01100 380 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-206ENST00000412056 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-206ENST00000412056 MRPS9P82933 396 aaKnown RBP15.97■□□□□ 0.15
CPNE1-206ENST00000412056 TNFAIP2Q03169 654 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 IQSEC1Q6DN90 963 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 PHF20Q9BVI0 1012 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 WDR11Q9BZH6 1224 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 EHMT1Q9H9B1 1298 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 XPNPEP3Q9NQH7 507 aa15.97■□□□□ 0.15
CPNE1-206ENST00000412056 GNEQ9Y223 722 aaKnown RBP15.97■□□□□ 0.15
CPNE1-206ENST00000412056 SYNRGQ9UMZ2 1314 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 DUSP11O75319 330 aaKnown RBP15.96■□□□□ 0.15
CPNE1-206ENST00000412056 EIF3JO75822 258 aaKnown RBP15.96■□□□□ 0.15
CPNE1-206ENST00000412056 ARIH2O95376 493 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 PGK1P00558 417 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 MNX1P50219 401 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-206ENST00000412056 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-206ENST00000412056 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 DIS3LQ8TF46 1054 aaKnown RBP15.96■□□□□ 0.15
CPNE1-206ENST00000412056 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 COPS5Q92905 334 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 RTEL1Q9NZ71 1219 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
CPNE1-206ENST00000412056 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 M0R2N6 131 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 ADAMTS4O75173 837 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 FARP2O94887 1054 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 MYCNP04198 464 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 TXNP10599 105 aaKnown RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 XBP1P17861 261 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 SREBF1P36956 1147 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 LRRC41Q15345 812 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 DUSP28Q4G0W2 176 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 TLK2Q86UE8 772 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 BLIDQ8IZY5 108 aa15.95■□□□□ 0.14
CPNE1-206ENST00000412056 INPP4AQ96PE3 977 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 UPF3AQ9H1J1 476 aaKnown RBP15.95■□□□□ 0.14
CPNE1-206ENST00000412056 CENPFP49454 3210 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 ARHGAP4P98171 946 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 SEMA3FQ13275 785 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 LY6KQ17RY6 165 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 XRRA1Q6P2D8 792 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 CCDC62Q6P9F0 684 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 ANKLE1Q8NAG6 615 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 OXER1Q8TDS5 423 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 MRVI1Q9Y6F6 885 aa15.94■□□□□ 0.14
CPNE1-206ENST00000412056 CTAGE5O15320 804 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 DYNC1LI2O43237 492 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-206ENST00000412056 STAM2O75886 525 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 C6orf222P0C671 652 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-206ENST00000412056 CAPN2P17655 700 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 ITGB5P18084 799 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 GJA9P57773 515 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 KRT40Q6A162 431 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 MCTP2Q6DN12 878 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 UBE2Q1Q7Z7E8 422 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 ARRDC4Q8NCT1 418 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 CRYGNQ8WXF5 182 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 UBIAD1Q9Y5Z9 338 aa15.93■□□□□ 0.14
CPNE1-206ENST00000412056 KBTBD13C9JR72 458 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 K7ELQ4 463 aaPredicted RBP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 DNM1LO00429 736 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 NKRFO15226 690 aaKnown RBP eCLIP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 UBA1P22314 1058 aaKnown RBP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 BEX3Q00994 111 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 CUL4AQ13619 759 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 GNPTABQ3T906 1256 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 KLHDC9Q8NEP7 349 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 OR6J1Q8NGC5 347 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 SNX21Q969T3 373 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 PAWRQ96IZ0 340 aaKnown RBP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 AP5M1Q9H0R1 490 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 DDX41Q9UJV9 622 aaKnown RBP15.92■□□□□ 0.14
CPNE1-206ENST00000412056 Q9Y3F1 56 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
CPNE1-206ENST00000412056 FIBPO43427 364 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 SORBS3O60504 671 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 GH1P01241 217 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 MMP1P03956 469 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 GJB2P29033 226 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 ICAM3P32942 547 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 KRT2P35908 639 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 NKX3-2P78367 333 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 SP2Q02086 613 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 TRIM29Q14134 588 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms