RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 USP26Q9BXU7 913 aa14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 FAM86C2PA6NEL3 165 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 KIF28PB7ZC32 967 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 NKRFO15226 690 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 PDHBP11177 359 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 WDR5P61964 334 aaKnown RBP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 PTPN11Q06124 597 aaPredicted RBP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 BFSP2Q13515 415 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 PTGISQ16647 500 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 CCDC62Q6P9F0 684 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 GDPD5Q8WTR4 605 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 SCFD2Q8WU76 684 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 KAT2BQ92831 832 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 CPVLQ9H3G5 476 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 BRWD1Q9NSI6 2320 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 MCM4P33991 863 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 LY6KQ17RY6 165 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 BRDTQ58F21 947 aaPredicted RBP14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
CHRNA1-205ENST00000409542 KPNA6O60684 536 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 NBNO60934 754 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 BAIAP3O94812 1187 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 REC8O95072 547 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 FGAP02671 866 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 ZNF543Q08ER8 600 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 ALX1Q15699 326 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 USH1GQ495M9 461 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 TMEM31Q5JXX7 168 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 DNERQ8NFT8 737 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 TCP11L1Q9NUJ3 509 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 MTUS1Q9ULD2 1270 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 NOD1Q9Y239 953 aa14.81□□□□□ -0.04
CHRNA1-205ENST00000409542 MMP3P08254 477 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 SNHG28P0DPA3 235 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 MX1P20591 662 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 KCNJ6P48051 423 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 ARHGAP1Q07960 439 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 SPRYD3Q8NCJ5 442 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 FAM227BQ96M60 508 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 TAAR1Q96RJ0 339 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 UBA5Q9GZZ9 404 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 SUGCTQ9HAC7 445 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 COL20A1Q9P218 1284 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 RAD50Q92878 1312 aa14.8□□□□□ -0.04
CHRNA1-205ENST00000409542 GPR37L1O60883 481 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 HAND2P61296 217 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 TRAF7Q6Q0C0 670 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 SEPT14Q6ZU15 432 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 LRRC8DQ7L1W4 858 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 CAGE1Q8TC20 777 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 AFAP1L1Q8TED9 768 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 WNT8BQ93098 351 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 HDAC6Q9UBN7 1215 aa14.79□□□□□ -0.04
CHRNA1-205ENST00000409542 A0A0D9SFI3 127 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 CXCL10P02778 98 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 CKBP12277 381 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 SELPP16109 830 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 ZBED2Q9BTP6 218 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 HCN4Q9Y3Q4 1203 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 WDR19Q8NEZ3 1342 aa14.78□□□□□ -0.04
CHRNA1-205ENST00000409542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 LINC01553A4QN01 128 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 DDX11L8A8MPP1 907 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 PI4K2BG5E9Z4 385 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 GJB5O95377 273 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ERVK-21P61565 698 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ZNF200P98182 395 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 HIC1Q14526 733 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 MBTPS1Q14703 1052 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 TRIM71Q2Q1W2 868 aaKnown RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 TBC1D10CQ8IV04 446 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 SYTL5Q8TDW5 730 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ZKSCAN3Q9BRR0 538 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ALG1Q9BT22 464 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 HELLSQ9NRZ9 838 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 LMCD1Q9NZU5 365 aa14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 ARIH1Q9Y4X5 557 aaPredicted RBP14.77□□□□□ -0.04
CHRNA1-205ENST00000409542 KIAA1217Q5T5P2 1943 aa14.77□□□□□ -0.05
CHRNA1-205ENST00000409542 GH1P01241 217 aa14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 RBL2Q08999 1139 aa14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 RGS22Q8NE09 1264 aa14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 MPHOSPH6Q99547 160 aaKnown RBP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 RAD9AQ99638 391 aa14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 UBE2ZQ9H832 354 aaPredicted RBP14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 GTF2IRD1Q9UHL9 959 aa14.76□□□□□ -0.05
CHRNA1-205ENST00000409542 SIP14410 1827 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms