RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 TRAF5O00463 557 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 USO1O60763 962 aaKnown RBP12.49□□□□□ -0.41
ITGA6-203ENST00000409532 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 WDR93Q6P2C0 686 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 KCTD1Q719H9 257 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 CCDC170Q8IYT3 715 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 DMGDHQ9UI17 866 aaKnown RBP12.49□□□□□ -0.41
ITGA6-203ENST00000409532 SALL4Q9UJQ4 1053 aa12.49□□□□□ -0.41
ITGA6-203ENST00000409532 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
ITGA6-203ENST00000409532 NPHP3-ACAD11A0A0J9YXS1 232 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 MAGEA1P43355 309 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 PTPROQ16827 1216 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 CENPPQ6IPU0 288 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 ERGIC2Q96RQ1 377 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 MYH1P12882 1939 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 TACC1O75410 805 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 GGCXP38435 758 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 SCNN1DP51172 638 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 RHBDL3P58872 404 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 TUBB4BP68371 445 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 CKAP4Q07065 602 aaKnown RBP12.48□□□□□ -0.41
ITGA6-203ENST00000409532 CCDC40Q4G0X9 1142 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 GOLGA6L1Q8N7Z2 621 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 EDIL3O43854 480 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 CCDC181Q5TID7 509 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 SELENOOQ9BVL4 669 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 RSPH14Q9UHP6 348 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 HPCAL4Q9UM19 191 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 PLAGL2Q9UPG8 496 aa12.48□□□□□ -0.41
ITGA6-203ENST00000409532 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 E9PMD0 336 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 SYF2O95926 243 aaKnown RBP12.47□□□□□ -0.41
ITGA6-203ENST00000409532 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
ITGA6-203ENST00000409532 SND1Q7KZF4 910 aaKnown RBP eCLIP12.47□□□□□ -0.415e-7■■■■□ 20.4
ITGA6-203ENST00000409532 MS4A14Q96JA4 679 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 POLLQ9UGP5 575 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 SIK3Q9Y2K2 1263 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 WNK3Q9BYP7 1800 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 SLC1A4P43007 532 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 PPARDQ03181 441 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 MAN2A1Q16706 1144 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 DNAAF5Q86Y56 855 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 ZSCAN29Q8IWY8 852 aaPredicted RBP12.47□□□□□ -0.41
ITGA6-203ENST00000409532 GOLGA5Q8TBA6 731 aa12.47□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 MAP9Q49MG5 647 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 CREG2Q8IUH2 290 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 RAD54LQ92698 747 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
ITGA6-203ENST00000409532 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 SNX12Q9UMY4 172 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 SNAP25P60880 206 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.41
ITGA6-203ENST00000409532 TTC19Q6DKK2 380 aaPredicted RBP12.46□□□□□ -0.41
ITGA6-203ENST00000409532 ADGRF4Q8IZF3 695 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 TRIM58Q8NG06 486 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
ITGA6-203ENST00000409532 PACSIN2Q9UNF0 486 aaPredicted RBP12.46□□□□□ -0.41
ITGA6-203ENST00000409532 RREB1Q92766 1687 aa12.46□□□□□ -0.42
ITGA6-203ENST00000409532 COL5A3P25940 1745 aaPredicted RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 USP17L10C9JJH3 530 aa12.46□□□□□ -0.42
ITGA6-203ENST00000409532 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 POLR2FP61218 127 aaKnown RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 SHROOM1Q2M3G4 852 aaPredicted RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.42
ITGA6-203ENST00000409532 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.42
ITGA6-203ENST00000409532 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.42
ITGA6-203ENST00000409532 DAGLAQ9Y4D2 1042 aa12.46□□□□□ -0.42
ITGA6-203ENST00000409532 MTMR8Q96EF0 704 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 OSBPL9Q96SU4 736 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 RAB34Q9BZG1 259 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 KIAA1024Q9UPX6 916 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 TUBBP07437 444 aa12.45□□□□□ -0.42
ITGA6-203ENST00000409532 STAT3P40763 770 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms