RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 PRLRP16471 622 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 C12orf60Q5U649 245 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 ALS2CLQ60I27 953 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 IFT20Q8IY31 132 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 CENPHQ9H3R5 247 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 MYH10P35580 1976 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 GRIN2DO15399 1336 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SEMA3FQ13275 785 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 FGFR1OPO95684 399 aaKnown RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 GLI1P08151 1106 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 FAM153BP0C7A2 387 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 HNRNPH3P31942 346 aaKnown RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 FAM153CQ494X1 144 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 FBXW10Q5XX13 1052 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SH3RF3Q8TEJ3 882 aaPredicted RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 TGFBRAP1Q8WUH2 860 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SH3GL2Q99962 352 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 MMTAG2Q9BU76 263 aaKnown RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SEC63Q9UGP8 760 aaKnown RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 FAM153AQ9UHL3 310 aa19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 PACSIN2Q9UNF0 486 aaPredicted RBP19.06■□□□□ 0.64
PACSIN2-205ENST00000407585 SSBP05455 408 aaKnown RBP eCLIP19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 CCDC40Q4G0X9 1142 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 IQCDQ96DY2 449 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 TMEM260Q9NX78 707 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 H0YHG0 523 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 ITIH3Q06033 890 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 KLHDC7AQ5VTJ3 777 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 GLIS3Q8NEA6 775 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 KRT12Q99456 494 aa19.05■□□□□ 0.64
PACSIN2-205ENST00000407585 KIAA0754O94854 1291 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 GNA11P29992 359 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 DIXDC1Q155Q3 683 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 TXNRD3Q86VQ6 643 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 MAPKAPK5Q8IW41 473 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 PALMO75781 387 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 PDXDC1Q6P996 788 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 MMS22LQ6ZRQ5 1243 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 LARP4BQ92615 738 aaKnown RBP19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 KAT2BQ92831 832 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 TSG101Q99816 390 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 CALCRLQ16602 461 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 SLC9C1Q4G0N8 1177 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 MAATS1Q7Z4T9 603 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 UBA5Q9GZZ9 404 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 ZMYND12Q9H0C1 365 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 TBC1D7Q9P0N9 293 aa19.04■□□□□ 0.64
PACSIN2-205ENST00000407585 POTEMA6NI47 508 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 TRAF5O00463 557 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 KCNQ4P56696 695 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 GUCY1A3Q02108 690 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 APBA1Q02410 837 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 EHHADHQ08426 723 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 GRB10Q13322 594 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 UNC13DQ70J99 1090 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 ZNF572Q7Z3I7 529 aaPredicted RBP19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 BAP1Q92560 729 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 UIMC1Q96RL1 719 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 MNAT1P51948 309 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 IRX3P78415 501 aaPredicted RBP19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 PAK2Q13177 524 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 PTPROQ16827 1216 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 KLHL7Q8IXQ5 586 aa19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 REXO1Q8N1G1 1221 aaKnown RBP19.03■□□□□ 0.64
PACSIN2-205ENST00000407585 PALM3A6NDB9 673 aaPredicted RBP19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 SFMBT2Q5VUG0 894 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 OTUD6BQ8N6M0 293 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 SNX29Q8TEQ0 813 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 RUBCNQ92622 972 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 CAVIN3Q969G5 261 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 PIGSQ96S52 555 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 BLOC1S4Q9NUP1 217 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 CAPN7Q9Y6W3 813 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 MARCH6O60337 910 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 CPP00450 1065 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 RAPGEF1Q13905 1077 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 HLTFQ14527 1009 aaKnown RBP eCLIP19.02■□□□□ 0.643e-6■■■■□ 26.6
PACSIN2-205ENST00000407585 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
PACSIN2-205ENST00000407585 LCA5LO95447 670 aa19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 LDHBP07195 334 aaKnown RBP19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 TBC1D5Q92609 795 aa19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 DDX12PQ92771 950 aa19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.63
PACSIN2-205ENST00000407585 TAF1P21675 1872 aa19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 EPB41P11171 864 aaKnown RBP19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 TRADDQ15628 312 aa19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 GUF1Q8N442 669 aaKnown RBP19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 GUCY2CP25092 1073 aa19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 HPDP32754 393 aaPredicted RBP19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 RNF187Q5TA31 235 aaPredicted RBP19.01■□□□□ 0.63
PACSIN2-205ENST00000407585 SPTY2D1Q68D10 685 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms