RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-204ENST00000405578 MCM3APO60318 1980 aa12.15□□□□□ -0.46
RPAIN-204ENST00000405578 ZNF536O15090 1300 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 PRRC2BQ5JSZ5 2229 aaKnown RBP12.14□□□□□ -0.47
RPAIN-204ENST00000405578 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
RPAIN-204ENST00000405578 TIMP1P01033 207 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 BMP1P13497 986 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 XBP1P17861 261 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 KCNQ1P51787 676 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 TFF2Q03403 129 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.472e-8■■■□□ 15.8
RPAIN-204ENST00000405578 TMEM240Q5SV17 173 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 HEATR3Q7Z4Q2 680 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-204ENST00000405578 WASF1Q92558 559 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-204ENST00000405578 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 MAML3Q96JK9 1138 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 MMP19Q99542 508 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 TSPYL2Q9H2G4 693 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-204ENST00000405578 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
RPAIN-204ENST00000405578 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 DEXIO95424 95 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 FUT2Q10981 343 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 RAB30Q15771 203 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 NTRK3Q16288 839 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 MFSD5Q6N075 450 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 C16orf59Q7L2K0 433 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 PHKBQ93100 1093 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 TMX3Q96JJ7 454 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 TOX2Q96NM4 488 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
RPAIN-204ENST00000405578 GLT8D2Q9H1C3 349 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 MSRAQ9UJ68 235 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 TBX21Q9UL17 535 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
RPAIN-204ENST00000405578 TRANK1O15050 2925 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 MYH4Q9Y623 1939 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 ACRP10323 421 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 SCG2P13521 617 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 NAPAP54920 295 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
RPAIN-204ENST00000405578 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-204ENST00000405578 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 TEX2Q8IWB9 1127 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 CCDC83Q8IWF9 413 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 CUL5Q93034 780 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 MPHOSPH6Q99547 160 aaKnown RBP12.12□□□□□ -0.47
RPAIN-204ENST00000405578 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
RPAIN-204ENST00000405578 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
RPAIN-204ENST00000405578 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-204ENST00000405578 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 PTPDC1A2A3K4 754 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 B4DLN1 442 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 ADAMTS4O75173 837 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 LARGE1O95461 756 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 CSF2RAP15509 400 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 ACLYP53396 1101 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 RNF207Q6ZRF8 634 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 ZNF365Q70YC5 407 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 FAM177A1Q8N128 213 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 SNX21Q969T3 373 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 SLC28A3Q9HAS3 691 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 ADD3Q9UEY8 706 aaKnown RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
RPAIN-204ENST00000405578 XIRP2A4UGR9 3374 aa12.11□□□□□ -0.47
RPAIN-204ENST00000405578 NFIBO00712 420 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 CFBP00751 764 aa12.1□□□□□ -0.47
RPAIN-204ENST00000405578 HSP90AA1P07900 732 aaKnown RBP12.1□□□□□ -0.47
RPAIN-204ENST00000405578 AKR1A1P14550 325 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms