RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
CDPF1-203ENST00000404583 PGBD1Q96JS3 809 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 ESYT2A0FGR8 921 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 MYADML2A6NDP7 307 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 KBTBD13C9JR72 458 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 DNM1LO00429 736 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 ST18O60284 1047 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 RGS20O76081 388 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 CLK2P49760 499 aaKnown RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 GJA9P57773 515 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 DUSP28Q4G0W2 176 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 RNF180Q86T96 592 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 TLK2Q86UE8 772 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 CCDC83Q8IWF9 413 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 NSUN7Q8NE18 718 aaKnown RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 COPS5Q92905 334 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 C11orf49Q9H6J7 331 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 SH3GLB2Q9NR46 395 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 RTEL1Q9NZ71 1219 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.27
CDPF1-203ENST00000404583 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
CDPF1-203ENST00000404583 CD2BP2O95400 341 aaKnown RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 GNA11P29992 359 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 NLRP5P59047 1200 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 JAKMIP3Q5VZ66 844 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 PCNX4Q63HM2 1172 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 CCDC62Q6P9F0 684 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 KLHDC9Q8NEP7 349 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 SENP6Q9GZR1 1112 aaPredicted RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 AP5M1Q9H0R1 490 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 UPF3AQ9H1J1 476 aaKnown RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 SPC25Q9HBM1 224 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 CEP290O15078 2479 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 CTAGE5O15320 804 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 JAK2O60674 1132 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 FOSP01100 380 aaPredicted RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 COL6A1P12109 1028 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 BEX3Q00994 111 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 KCNA10Q16322 511 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
CDPF1-203ENST00000404583 Q9Y3F1 56 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 MRVI1Q9Y6F6 885 aa16.7■□□□□ 0.26
CDPF1-203ENST00000404583 DNAH12Q6ZR08 3092 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDPF1-203ENST00000404583 AP3B2Q13367 1082 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
CDPF1-203ENST00000404583 OR6J1Q8NGC5 347 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 RASGRP4Q8TDF6 673 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 ANO3Q9BYT9 981 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 EHMT1Q9H9B1 1298 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 DDX41Q9UJV9 622 aaKnown RBP16.69■□□□□ 0.26
CDPF1-203ENST00000404583 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
CDPF1-203ENST00000404583 ALPK3Q96L96 1907 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 STAM2O75886 525 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 CST5P28325 142 aaPredicted RBP16.68■□□□□ 0.26
CDPF1-203ENST00000404583 NKX3-2P78367 333 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 REXO1Q8N1G1 1221 aaKnown RBP16.68■□□□□ 0.26
CDPF1-203ENST00000404583 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 INPP4AQ96PE3 977 aaPredicted RBP16.68■□□□□ 0.26
CDPF1-203ENST00000404583 TSEN34Q9BSV6 310 aaKnown RBP16.68■□□□□ 0.26
CDPF1-203ENST00000404583 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 PHF24Q9UPV7 400 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 DOCK5Q9H7D0 1870 aa16.68■□□□□ 0.26
CDPF1-203ENST00000404583 ASGR1P07306 291 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 ACLYP53396 1101 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 SP2Q02086 613 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 FSCN1Q16658 493 aaKnown RBP16.67■□□□□ 0.26
CDPF1-203ENST00000404583 GNPTABQ3T906 1256 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
CDPF1-203ENST00000404583 WASF1Q92558 559 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
CDPF1-203ENST00000404583 SORBS3O60504 671 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 GH1P01241 217 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 XBP1P17861 261 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 SREBF1P36956 1147 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 ATN1P54259 1190 aaPredicted RBP16.66■□□□□ 0.26
CDPF1-203ENST00000404583 SEMA3FQ13275 785 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 NPY5RQ15761 445 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 KCNV1Q6PIU1 500 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 BLIDQ8IZY5 108 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 PCSK9Q8NBP7 692 aaKnown RBP16.66■□□□□ 0.26
CDPF1-203ENST00000404583 DPF3Q92784 378 aa16.66■□□□□ 0.26
CDPF1-203ENST00000404583 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms