RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
CACNA1C-213ENST00000399629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNA1C-213ENST00000399629 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
CACNA1C-213ENST00000399629 KCNJ18B7U540 433 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 KCNJ12Q14500 433 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 MCUQ8NE86 351 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 HVCN1Q96D96 273 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 PGBD1Q96JS3 809 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 TUBBP07437 444 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 FCER1AP12319 257 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 ACTN1P12814 892 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 NAA25Q14CX7 972 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 NOSTRINQ8IVI9 506 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 SCN4BQ8IWT1 228 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 OR6B2Q6IFH4 312 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 OTUD7AQ8TE49 926 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 HPCAL4Q9UM19 191 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 INSRP06213 1382 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 NVLO15381 856 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 MNAT1P51948 309 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 PSMC2P35998 433 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 OR6B3Q8NGW1 331 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
CACNA1C-213ENST00000399629 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 TUBB2AQ13885 445 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 RWDD4Q6NW29 188 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 SCARA5Q6ZMJ2 495 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 CAPN12Q6ZSI9 719 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 ZNF653Q96CK0 615 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 PIGSQ96S52 555 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 TUBB2BQ9BVA1 445 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 SGK1O00141 431 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 MTMR3Q13615 1198 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 CCDC13Q8IYE1 715 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 KRT222Q8N1A0 295 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 SLC12A1Q13621 1099 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 PGBD3Q8N328 593 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 FAM81BQ96LP2 452 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 GOLGA8SH3BPF8 625 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 UBE3CQ15386 1083 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 DYRK4Q9NR20 520 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 JAK2O60674 1132 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 ATP6V1E1P36543 226 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 BCAP29Q9UHQ4 241 aa13.12□□□□□ -0.31
CACNA1C-213ENST00000399629 CAPN2P17655 700 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 ZNF274Q96GC6 653 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 TFRCP02786 760 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 ATF2P15336 505 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 TNFAIP2Q03169 654 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 CCDC170Q8IYT3 715 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 HINFPQ9BQA5 517 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 ZNF148Q9UQR1 794 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 MEIS1O00470 390 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 VPS41P49754 854 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 CEP120Q8N960 986 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 SPATA17Q96L03 361 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 EBAG9O00559 213 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 SLC13A4Q9UKG4 626 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
CACNA1C-213ENST00000399629 LAD1O00515 517 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 GH2P01242 217 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 ACCSLQ4AC99 568 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
CACNA1C-213ENST00000399629 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms