RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RPS6P62753 249 aaKnown RBP19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 LETM2Q2VYF4 491 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 RNF207Q6ZRF8 634 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.26■□□□□ 0.675e-6■■■■■ 45.5
TSPAN4-205ENST00000397406 KCNG4Q8TDN1 519 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 SYTL5Q8TDW5 730 aaPredicted RBP19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
TSPAN4-205ENST00000397406 COPB2P35606 906 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 BAATQ14032 418 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 NSMFQ6X4W1 530 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 U2AF1L4Q8WU68 220 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 TRIB2Q92519 343 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 A1CFQ9NQ94 594 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 PAK6Q9NQU5 681 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 RPTORQ8N122 1335 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 PPP6R2O75170 966 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 GADD45BO75293 160 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 BMP15O95972 392 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 PTMSP20962 102 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 MCM7P33993 719 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 USP11P51784 963 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 UBXN2AP68543 259 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 ARHGAP4P98171 946 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 ORC2Q13416 577 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 MORN1Q5T089 497 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 C4orf32Q8N8J7 132 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 SHCBP1Q8NEM2 672 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 CYP39A1Q9NYL5 469 aa19.25■□□□□ 0.67
TSPAN4-205ENST00000397406 CCNT1O60563 726 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 SGPL1O95470 568 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 CYP3A4P08684 503 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 ERCC3P19447 782 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 ATP2C1P98194 919 aaPredicted RBP19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 PPP4R3AQ6IN85 833 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 GPR142Q7Z601 462 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 EHMT1Q9H9B1 1298 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 MRVI1Q9Y6F6 885 aa19.24■□□□□ 0.67
TSPAN4-205ENST00000397406 CYP3A7-CYP3A51PA0A087WV96 503 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 TDP2O95551 362 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 CYP2B6P20813 491 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 CYP3A7P24462 503 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 MARCKSP29966 332 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 PTGDRQ13258 359 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 CCL14Q16627 93 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 MOXD1Q6UVY6 613 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 MBOAT7Q96N66 472 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 TAAR1Q96RJ0 339 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 MROH8Q9H579 483 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 PLXNA1Q9UIW2 1896 aa19.23■□□□□ 0.67
TSPAN4-205ENST00000397406 SLC34A2O95436 690 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 GCFC2P16383 781 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 CIITAP33076 1130 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 ME1P48163 572 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 UBE2HP62256 183 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 DEFB118Q96PH6 123 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 NAP1L4Q99733 375 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 CRISPLD2Q9H0B8 497 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 TMEM60Q9H2L4 133 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 FBXO2Q9UK22 296 aaPredicted RBP19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 LRRC37A2A6NM11 1700 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 PFASO15067 1338 aa19.22■□□□□ 0.67
TSPAN4-205ENST00000397406 SLC37A4O43826 429 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 NEMFO60524 1076 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 HMGCRP04035 888 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 PTPREP23469 700 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 MAPK4P31152 587 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 MNX1P50219 401 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 CCNA1P78396 465 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 AXDND1Q5T1B0 1012 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 MAP3K21Q5TCX8 1036 aa19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 PURBQ96QR8 312 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-205ENST00000397406 ZNF236Q9UL36 1845 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 LAD1O00515 517 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 ADALQ6DHV7 355 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 PLEKHH3Q7Z736 793 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 KRI1Q8N9T8 703 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.2■□□□□ 0.662e-6■■■■□ 23.5
TSPAN4-205ENST00000397406 PXMP2Q9NR77 195 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 FLRT1Q9NZU1 646 aa19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 SRPRBQ9Y5M8 271 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-205ENST00000397406 KIAA1217Q5T5P2 1943 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 CUTAO60888 179 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 GRIN1Q05586 938 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 ARL6IP4Q66PJ3 421 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 IL31RAQ8NI17 732 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 GPT2Q8TD30 523 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 MTMR9Q96QG7 549 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 RMDN3Q96TC7 470 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 NUDT12Q9BQG2 462 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 PDCD2LQ9BRP1 358 aa19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-205ENST00000397406 IGLV3-22A0A075B6J6 115 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms