RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CCDC83Q8IWF9 413 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 NSUN7Q8NE18 718 aaKnown RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 SCFD2Q8WU76 684 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 CCDC12Q8WUD4 166 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 COPS5Q92905 334 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 ZSCAN31Q96LW9 406 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 UPF3AQ9H1J1 476 aaKnown RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 C6orf50Q9HD87 102 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 SH3GLB2Q9NR46 395 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 RTEL1Q9NZ71 1219 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 ORC3Q9UBD5 711 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-201ENST00000395761 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
CXCL1-201ENST00000395761 SPDYE3A6NKU9 549 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 DNM1LO00429 736 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 CTAGE5O15320 804 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 DYNC1LI2O43237 492 aaPredicted RBP18.97■□□□□ 0.63
CXCL1-201ENST00000395761 ST18O60284 1047 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
CXCL1-201ENST00000395761 COL6A1P12109 1028 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 GJA9P57773 515 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 MLLT1Q03111 559 aaPredicted RBP18.97■□□□□ 0.63
CXCL1-201ENST00000395761 JAKMIP3Q5VZ66 844 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 CCDC62Q6P9F0 684 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 NECAB2Q7Z6G3 386 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 KLHDC9Q8NEP7 349 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 GLT8D2Q9H1C3 349 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 C11orf49Q9H6J7 331 aa18.97■□□□□ 0.63
CXCL1-201ENST00000395761 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
CXCL1-201ENST00000395761 BEX3Q00994 111 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 TTLL4Q14679 1199 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 LY6KQ17RY6 165 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 PCNX4Q63HM2 1172 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 CCSAPQ6IQ19 270 aaPredicted RBP18.96■□□□□ 0.63
CXCL1-201ENST00000395761 RNF180Q86T96 592 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 TLK2Q86UE8 772 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 CCDC148Q8NFR7 591 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 RASGRP4Q8TDF6 673 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
CXCL1-201ENST00000395761 GJB4Q9NTQ9 266 aa18.96■□□□□ 0.63
CXCL1-201ENST00000395761 KBTBD13C9JR72 458 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 FOSP01100 380 aaPredicted RBP18.95■□□□□ 0.62
CXCL1-201ENST00000395761 GNA11P29992 359 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 NLRP5P59047 1200 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 TEX2Q8IWB9 1127 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
CXCL1-201ENST00000395761 ANO3Q9BYT9 981 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 SENP6Q9GZR1 1112 aaPredicted RBP18.95■□□□□ 0.62
CXCL1-201ENST00000395761 AP5M1Q9H0R1 490 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 DDX41Q9UJV9 622 aaKnown RBP18.95■□□□□ 0.62
CXCL1-201ENST00000395761 KCNJ14Q9UNX9 436 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 Q9Y3F1 56 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 MRVI1Q9Y6F6 885 aa18.95■□□□□ 0.62
CXCL1-201ENST00000395761 NKX3-2P78367 333 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 AP3B2Q13367 1082 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 NPY5RQ15761 445 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 KCNA10Q16322 511 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 XRRA1Q6P2D8 792 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 REXO1Q8N1G1 1221 aaKnown RBP18.94■□□□□ 0.62
CXCL1-201ENST00000395761 FERMT2Q96AC1 680 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 ALG1Q9BT22 464 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 SPC25Q9HBM1 224 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 PHF24Q9UPV7 400 aa18.94■□□□□ 0.62
CXCL1-201ENST00000395761 NKRFO15226 690 aaKnown RBP eCLIP18.93■□□□□ 0.62
CXCL1-201ENST00000395761 CST5P28325 142 aaPredicted RBP18.93■□□□□ 0.62
CXCL1-201ENST00000395761 SP2Q02086 613 aa18.93■□□□□ 0.62
CXCL1-201ENST00000395761 FSCN1Q16658 493 aaKnown RBP18.93■□□□□ 0.62
CXCL1-201ENST00000395761 OR6J1Q8NGC5 347 aa18.93■□□□□ 0.62
CXCL1-201ENST00000395761 INPP4AQ96PE3 977 aaPredicted RBP18.93■□□□□ 0.62
CXCL1-201ENST00000395761 EHMT1Q9H9B1 1298 aa18.93■□□□□ 0.62
CXCL1-201ENST00000395761 PCDHA4Q9UN74 947 aa18.93■□□□□ 0.62
CXCL1-201ENST00000395761 SPATA31C2B4DYI2 1134 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 STAM2O75886 525 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 ITGB5P18084 799 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 ACLYP53396 1101 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 FOSBP53539 338 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 SEMA3FQ13275 785 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 BICD2Q8TD16 824 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 WASF1Q92558 559 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 LLPHQ9BRT6 129 aaKnown RBP18.92■□□□□ 0.62
CXCL1-201ENST00000395761 TSEN34Q9BSV6 310 aaKnown RBP18.92■□□□□ 0.62
CXCL1-201ENST00000395761 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 BCAS3Q9H6U6 928 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 UBIAD1Q9Y5Z9 338 aa18.92■□□□□ 0.62
CXCL1-201ENST00000395761 MKI67P46013 3256 aaKnown RBP18.92■□□□□ 0.62
CXCL1-201ENST00000395761 SORBS3O60504 671 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 GH1P01241 217 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 ASGR1P07306 291 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 ICAM3P32942 547 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 SREBF1P36956 1147 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 MCM2P49736 904 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 ATN1P54259 1190 aaPredicted RBP18.91■□□□□ 0.62
CXCL1-201ENST00000395761 ARHGAP1Q07960 439 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 BLIDQ8IZY5 108 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 DAGLBQ8NCG7 672 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 CRYGNQ8WXF5 182 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms