RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 DEUP1Q05D60 604 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 TRIM42Q8IWZ5 723 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 OGFOD1Q8N543 542 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■□□□□ 8.1
SREBF1-203ENST00000395751 USTQ9Y2C2 406 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ARL2BPQ9Y2Y0 163 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 KDM6BO15054 1643 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 REREQ9P2R6 1566 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 POLA2Q14181 598 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 SPARCL1Q14515 664 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 PLS1Q14651 629 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 PRR16Q569H4 304 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ACBD5Q5T8D3 534 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-203ENST00000395751 CCDC89Q8N998 374 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 DNAJC9Q8WXX5 260 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-203ENST00000395751 METTL14Q9HCE5 456 aaKnown RBP18.48■□□□□ 0.55
SREBF1-203ENST00000395751 DLGAP2Q9P1A6 1054 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 COMMD10Q9Y6G5 202 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 PCYT1AP49585 367 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 GSTO1P78417 241 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 NR5A1Q13285 461 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 KRT80Q6KB66 452 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 CYP4F22Q6NT55 531 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ZNF579Q8NAF0 562 aaKnown RBP18.48■□□□□ 0.55
SREBF1-203ENST00000395751 HIC2Q96JB3 615 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 NT5C3AQ9H0P0 336 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 COPRSQ9NQ92 184 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ADAMTS1Q9UHI8 967 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 G3BP2Q9UN86 482 aaKnown RBP18.48■□□□□ 0.55
SREBF1-203ENST00000395751 PCDHB6Q9Y5E3 794 aa18.48■□□□□ 0.55
SREBF1-203ENST00000395751 ARHGAP4P98171 946 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 ADAM9Q13443 819 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 ANKIB1Q9P2G1 1089 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 PODXLO00592 558 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 PSMD7P51665 324 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 FAM26FQ5R3K3 315 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 AIFM3Q96NN9 605 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 ETAA1Q9NY74 926 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 IFNAR1P17181 557 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 FKBP3Q00688 224 aaKnown RBP18.47■□□□□ 0.55
SREBF1-203ENST00000395751 KDM7AQ6ZMT4 941 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 TEKT1Q969V4 418 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 RNF26Q9BY78 433 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-203ENST00000395751 CCDC68Q9H2F9 335 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 ERVK-7P63135 1459 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 EXOC3O60645 756 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 SKAP2O75563 359 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-203ENST00000395751 RBM43Q6ZSC3 357 aaKnown RBP18.47■□□□□ 0.55
SREBF1-203ENST00000395751 XPO6Q96QU8 1125 aaKnown RBP18.47■□□□□ 0.55
SREBF1-203ENST00000395751 DRC3Q9H069 523 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 AZI2Q9H6S1 392 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 ZFP69BQ9UJL9 534 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 TRPC6Q9Y210 931 aa18.47■□□□□ 0.55
SREBF1-203ENST00000395751 FGGP02679 453 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 KCNA3P22001 575 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 MKRN3Q13064 507 aaKnown RBP18.46■□□□□ 0.55
SREBF1-203ENST00000395751 SNX24Q9Y343 169 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 WDR62O43379 1518 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 MED23Q9ULK4 1368 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 PSMD14O00487 310 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ACSL3O95573 720 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 TBC1D22AQ8WUA7 517 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ZFATQ9P243 1243 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 SLC4A7Q9Y6M7 1214 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ZNF185O15231 689 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 OR52Z1P0C646 297 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 GNAT1P11488 350 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 PMS2P54278 862 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ANAPC5Q9UJX4 755 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
SREBF1-203ENST00000395751 ZFXP17010 805 aaPredicted RBP18.46■□□□□ 0.54
SREBF1-203ENST00000395751 AGGF1Q8N302 714 aaeCLIP18.46■□□□□ 0.54
SREBF1-203ENST00000395751 FAM133AQ8N9E0 248 aa18.46■□□□□ 0.54
SREBF1-203ENST00000395751 DNM3Q9UQ16 869 aa18.46■□□□□ 0.54
SREBF1-203ENST00000395751 USP15Q9Y4E8 981 aaPredicted RBP18.46■□□□□ 0.54
SREBF1-203ENST00000395751 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
SREBF1-203ENST00000395751 NEURL1BA8MQ27 555 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 GJB4Q9NTQ9 266 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 NDE1Q9NXR1 346 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 RAB21Q9UL25 225 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 EXOC1LA0A1B0GW35 172 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 SERPINB4P48594 390 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 WDR44Q5JSH3 913 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 SPATA21Q7Z572 469 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 AFAP1L2Q8N4X5 818 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 LRRN4CLQ8ND94 238 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
SREBF1-203ENST00000395751 TRIM55Q9BYV6 548 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 ATP10BO94823 1461 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 KDRP35968 1356 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 NVLO15381 856 aaKnown RBP18.45■□□□□ 0.54
SREBF1-203ENST00000395751 NCK2O43639 380 aa18.45■□□□□ 0.54
SREBF1-203ENST00000395751 DKC1O60832 514 aaKnown RBP eCLIP18.45■□□□□ 0.547e-7■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms