RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
RTN1-203ENST00000395090 PFKFB3Q16875 520 aaPredicted RBP13.14□□□□□ -0.31
RTN1-203ENST00000395090 TBCELQ5QJ74 424 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
RTN1-203ENST00000395090 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
RTN1-203ENST00000395090 GBP4Q96PP9 640 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
RTN1-203ENST00000395090 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
RTN1-203ENST00000395090 MCM4P33991 863 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 RESTQ13127 1097 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 KRT40Q6A162 431 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 RASGRP2Q7LDG7 609 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
RTN1-203ENST00000395090 SSC5DA1L4H1 1573 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 SPINT1O43278 529 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 GFRA3O60609 400 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
RTN1-203ENST00000395090 NDUFB10O96000 172 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 SCG2P13521 617 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 INPP5BP32019 993 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 ECE1P42892 770 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
RTN1-203ENST00000395090 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 INSM2Q96T92 566 aaPredicted RBP13.13□□□□□ -0.31
RTN1-203ENST00000395090 MKNK1Q9BUB5 465 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 SH2D4AQ9H788 454 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
RTN1-203ENST00000395090 MYH4Q9Y623 1939 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
RTN1-203ENST00000395090 GPC1P35052 558 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 SLC1A4P43007 532 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
RTN1-203ENST00000395090 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 SCYL3Q8IZE3 742 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 SHISA4Q96DD7 197 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
RTN1-203ENST00000395090 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
RTN1-203ENST00000395090 DGAT1O75907 488 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 MMP1P03956 469 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 XBP1P17861 261 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 U2AF2P26368 475 aaKnown RBP eCLIP13.11□□□□□ -0.31
RTN1-203ENST00000395090 PSMA6P60900 246 aaKnown RBP13.11□□□□□ -0.31
RTN1-203ENST00000395090 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 TRIM29Q14134 588 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.11□□□□□ -0.31
RTN1-203ENST00000395090 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
RTN1-203ENST00000395090 USP3Q9Y6I4 520 aa13.11□□□□□ -0.31
RTN1-203ENST00000395090 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
RTN1-203ENST00000395090 FRMPD2Q68DX3 1309 aaPredicted RBP13.11□□□□□ -0.31
RTN1-203ENST00000395090 PLA2G6O60733 806 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 PTPRAP18433 802 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 ADGRF4Q8IZF3 695 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 VTI1AQ96AJ9 217 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 CPVLQ9H3G5 476 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 BMP2P12643 396 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 BMP3P12645 472 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 NPY5RQ15761 445 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 GLIS2Q9BZE0 524 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 FOXP1Q9H334 677 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
RTN1-203ENST00000395090 BARHL2Q9NY43 387 aa13.1□□□□□ -0.31
RTN1-203ENST00000395090 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 SERPINB4P48594 390 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 RNF144AP50876 292 aaPredicted RBP13.09□□□□□ -0.31
RTN1-203ENST00000395090 DNM1Q05193 864 aaKnown RBP13.09□□□□□ -0.31
RTN1-203ENST00000395090 MAP3K11Q16584 847 aa13.09□□□□□ -0.31
RTN1-203ENST00000395090 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms