RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 UBA5Q9GZZ9 404 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 TFR2Q9UP52 801 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 ZC3H4Q9UPT8 1303 aaKnown RBP13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 ENC1O14682 589 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 GDF11O95390 407 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 FNTAP49354 379 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 GRIN1Q05586 938 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 HDAC6Q9UBN7 1215 aa13.19□□□□□ -0.3
PPP3CB-203ENST00000394828 FOXN1O15353 648 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 CMA1P23946 247 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 RIOX1Q9H6W3 641 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 AGPSO00116 658 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 SRGAP2O75044 1071 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 EGFRP00533 1210 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 PFKFB1P16118 471 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 SARNPP82979 210 aaKnown RBP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 PDCLQ13371 301 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 SEPT2Q15019 361 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
PPP3CB-203ENST00000394828 WNT10BO00744 389 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 EEF2P13639 858 aaKnown RBP13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 SETQ01105 290 aaPredicted RBP13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 FAM151AQ8WW52 585 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 PIGSQ96S52 555 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 HPSEQ9Y251 543 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 USP8P40818 1118 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 ATP1A2P50993 1020 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 RESP18Q5W5W9 173 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 MKL1Q969V6 931 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 FAM107BQ9H098 131 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 MYOZ2Q9NPC6 264 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 TRIM10Q9UDY6 481 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 AP1G2O75843 785 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 RNF187Q5TA31 235 aaPredicted RBP13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 RASGRP4Q8TDF6 673 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
PPP3CB-203ENST00000394828 SBF1O95248 1867 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CTAGE15A4D2H0 777 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 GOLGA6CA6NDK9 693 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 GOLGA6DP0CG33 693 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CTAGE8P0CG41 777 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 SNX1Q13596 522 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CTAGE6Q86UF2 777 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CTAGE4Q8IX94 777 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 FAM76AQ8TAV0 307 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 RRP36Q96EU6 259 aaKnown RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 ZEB2O60315 1214 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CALML3P27482 149 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 ZNF280AP59817 542 aaPredicted RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 MYL5Q02045 173 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 STIM1Q13586 685 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 SH2D3CQ8N5H7 860 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 KRI1Q8N9T8 703 aaKnown RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 DDX20Q9UHI6 824 aaKnown RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 SCAF8Q9UPN6 1271 aaKnown RBP13.16□□□□□ -0.3
PPP3CB-203ENST00000394828 FZD9O00144 591 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 COBLO75128 1261 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 GH2P01242 217 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 PTPREP23469 700 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 NAA25Q14CX7 972 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 TNIP1Q15025 636 aa13.15□□□□□ -0.3
PPP3CB-203ENST00000394828 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms