RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 ABCC6O95255 1503 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 KCNK3O14649 394 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 FMNL3Q8IVF7 1028 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 HSD3B7Q9H2F3 369 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 PSTPIP2Q9H939 334 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 L1RE1Q9UN81 338 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 HEXIM1O94992 359 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 KRT13P13646 458 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 EHHADHQ08426 723 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 GSPT2Q8IYD1 628 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-209ENST00000394804 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 CDK8P49336 464 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ATP1A2P50993 1020 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 AGPAT5Q9NUQ2 364 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 STIM2Q9P246 746 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 GGCXP38435 758 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 SLC7A5Q01650 507 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ADAM9Q13443 819 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 COA7Q96BR5 231 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 TMEM60Q9H2L4 133 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 FCER1AP12319 257 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 SLC1A4P43007 532 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ORC2Q13416 577 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ALS2CLQ60I27 953 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ADGRA1Q86SQ6 560 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ANKZF1Q9H8Y5 726 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 MLXIPQ9HAP2 919 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 EPB41L5Q9HCM4 733 aa12.85□□□□□ -0.35
UBE2D3-209ENST00000394804 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 SYCE1Q8N0S2 351 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 KRT12Q99456 494 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 NAP1L3Q99457 506 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 SERPING1P05155 500 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 KCNQ4P56696 695 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 SEPT2Q15019 361 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 H3BQF6 201 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 ATP2C2O75185 946 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 KCTD16Q68DU8 428 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 FAM196AQ6ZSG2 479 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 OSBPL9Q96SU4 736 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 N4BP2Q86UW6 1770 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-209ENST00000394804 FTCDO95954 541 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 LIG3P49916 1009 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 STK4Q13043 487 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 TRAPPC11Q7Z392 1133 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 SPATA20Q8TB22 786 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 DDX12PQ92771 950 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 CCDC114Q96M63 670 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 DISP2A7MBM2 1401 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 N4BP1O75113 896 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 GCNT3O95395 438 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 SRLQ86TD4 932 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 PROM2Q8N271 834 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 SRP68Q9UHB9 627 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 FRMD4BQ9Y2L6 1034 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 GTF2IP78347 998 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 GLE1Q53GS7 698 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
UBE2D3-209ENST00000394804 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms