RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 CCDC152Q4G0S7 254 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 CFAP221Q4G0U5 840 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 SLC10A5Q5PT55 438 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 PRR5LQ6MZQ0 368 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 DIS3L2Q8IYB7 885 aaKnown RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 L3MBTL3Q96JM7 780 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-202ENST00000394180 LAMB2P55268 1798 aa24.03■■□□□ 1.44
CLDND1-202ENST00000394180 RCCD1A6NED2 376 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 HNRNPH3P31942 346 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 BYSLQ13895 437 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 KCNB1Q14721 858 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 ZNF658Q5TYW1 1059 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 CNOT10Q9H9A5 744 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 PPANQ9NQ55 473 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 TTC36A6NLP5 189 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 POLRMTO00411 1230 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 MPHOSPH10O00566 681 aaKnown RBP24.02■■□□□ 1.44
CLDND1-202ENST00000394180 LIFRP42702 1097 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 BLMHQ13867 455 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 ITIH4Q14624 930 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 LDHAL6AQ6ZMR3 332 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 TEX9Q8N6V9 391 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 SLC12A4Q9UP95 1085 aa24.02■■□□□ 1.44
CLDND1-202ENST00000394180 COL4A1P02462 1669 aa24.01■■□□□ 1.43
CLDND1-202ENST00000394180 EME2A4GXA9 379 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-202ENST00000394180 IFIT1P09914 478 aaKnown RBP24.01■■□□□ 1.43
CLDND1-202ENST00000394180 SRGNP10124 158 aa24.01■■□□□ 1.43
CLDND1-202ENST00000394180 SLC7A5Q01650 507 aa24.01■■□□□ 1.43
CLDND1-202ENST00000394180 ACCSLQ4AC99 568 aa24.01■■□□□ 1.43
CLDND1-202ENST00000394180 CACNA2D4Q7Z3S7 1137 aa24.01■■□□□ 1.43
CLDND1-202ENST00000394180 FRMD3A2A2Y4 597 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 A6NHS1 94 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 CCT8L1PA6NM43 557 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 BTBD18B2RXH4 712 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 GTPBP6O43824 516 aaPredicted RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 ORC4O43929 436 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 RANBP6O60518 1105 aaKnown RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 ANP32DO95626 131 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 SSBP05455 408 aaKnown RBP eCLIP24■■□□□ 1.43
CLDND1-202ENST00000394180 PARP1P09874 1014 aaKnown RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 FERP16591 822 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 RRAGBQ5VZM2 374 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 CCDC125Q86Z20 511 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 NLGN1Q8N2Q7 840 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 LRRC45Q96CN5 670 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 NDST4Q9H3R1 872 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 PJA2O43164 708 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 CCND1P24385 295 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 IL15P40933 162 aaPredicted RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 RAB27AP51159 221 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 MYO1EQ12965 1108 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 RNF10Q8N5U6 811 aaKnown RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 APPBP2Q92624 585 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 NLRP3Q96P20 1036 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 FAM217BQ9NTX9 383 aaPredicted RBP24■■□□□ 1.43
CLDND1-202ENST00000394180 TAF1P21675 1872 aa24■■□□□ 1.43
CLDND1-202ENST00000394180 CASZ1Q86V15 1759 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 RCAN1P53805 252 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 PPP2R2AP63151 447 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 SPRED3Q2MJR0 410 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 ANKS4BQ8N8V4 417 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 DRAXINQ8NBI3 349 aaPredicted RBP23.99■■□□□ 1.43
CLDND1-202ENST00000394180 NELFBQ8WX92 580 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 PHKBQ93100 1093 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 PCDHB6Q9Y5E3 794 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 GOLGA6L10A0A0M3HER8 536 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 GOLGA8AA7E2F4 631 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 CIAO1O76071 339 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 SEPT2Q15019 361 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 SF3B3Q15393 1217 aaKnown RBP23.99■■□□□ 1.43
CLDND1-202ENST00000394180 CCDC63Q8NA47 563 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 ZFAND2BQ8WV99 257 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 STAMBPL1Q96FJ0 436 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 CNNM1Q9NRU3 951 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 BAIAP2L1Q9UHR4 511 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 NFU1Q9UMS0 254 aa23.99■■□□□ 1.43
CLDND1-202ENST00000394180 MMP10P09238 476 aa23.98■■□□□ 1.43
CLDND1-202ENST00000394180 AFMP43652 599 aa23.98■■□□□ 1.43
CLDND1-202ENST00000394180 CARSP49589 748 aaKnown RBP23.98■■□□□ 1.43
CLDND1-202ENST00000394180 HIBCHQ6NVY1 386 aaPredicted RBP23.98■■□□□ 1.43
CLDND1-202ENST00000394180 PLAAQ9Y263 795 aa23.98■■□□□ 1.43
CLDND1-202ENST00000394180 TNRC6CQ9HCJ0 1690 aaKnown RBP23.98■■□□□ 1.43
CLDND1-202ENST00000394180 MTMR3Q13615 1198 aa23.98■■□□□ 1.43
CLDND1-202ENST00000394180 TRIM22Q8IYM9 498 aa23.98■■□□□ 1.43
CLDND1-202ENST00000394180 TRIM75PA6NK02 468 aa23.97■■□□□ 1.43
CLDND1-202ENST00000394180 ASAP2O43150 1006 aa23.97■■□□□ 1.43
CLDND1-202ENST00000394180 HEXIM1O94992 359 aaKnown RBP23.97■■□□□ 1.43
CLDND1-202ENST00000394180 HAND2P61296 217 aa23.97■■□□□ 1.43
CLDND1-202ENST00000394180 CUL1Q13616 776 aa23.97■■□□□ 1.43
CLDND1-202ENST00000394180 CCDC197Q8NCU1 140 aa23.97■■□□□ 1.43
CLDND1-202ENST00000394180 SPDYE1Q8NFV5 336 aaPredicted RBP23.97■■□□□ 1.43
CLDND1-202ENST00000394180 A0A087X0B3 334 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 MACROD2A1Z1Q3 448 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 RTN3O95197 1032 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 GLI1P08151 1106 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 DRD4P21917 467 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 TIMM10P62072 90 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 PPP1R7Q15435 360 aa23.96■■□□□ 1.43
CLDND1-202ENST00000394180 IFI16Q16666 785 aaKnown RBP23.96■■□□□ 1.43
CLDND1-202ENST00000394180 ZC3H12AQ5D1E8 599 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms