RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 RASSF7Q02833 373 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 PKN1Q16512 942 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 DGKHQ86XP1 1220 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 SCUBE3Q8IX30 993 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.33
CASC3-202ENST00000394114 NEDD1Q8NHV4 660 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 RELTQ969Z4 430 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 MYO19Q96H55 970 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 ZNF396Q96N95 335 aaPredicted RBP6.71□□□□□ -1.33
CASC3-202ENST00000394114 ZNRF3Q9ULT6 936 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 PSME4Q14997 1843 aa6.71□□□□□ -1.33
CASC3-202ENST00000394114 CNTNAP5Q8WYK1 1306 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 FAM205CA6NFA0 338 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 NFKBIEO00221 500 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 MYCP01106 439 aaPredicted RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 VIL1P09327 827 aaKnown RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 SHMT1P34896 483 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 MASP1P48740 699 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 RCAN1P53805 252 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 GABPAQ06546 454 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 CXCL9Q07325 125 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 STK38Q15208 465 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 WASF1Q92558 559 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 RNF26Q9BY78 433 aaPredicted RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 OSBPL7Q9BZF2 842 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 DNAJC18Q9H819 358 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 VEZTQ9HBM0 779 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 ISY1Q9ULR0 285 aaKnown RBP6.71□□□□□ -1.34
CASC3-202ENST00000394114 ELP1O95163 1332 aa6.71□□□□□ -1.34
CASC3-202ENST00000394114 FER1L6Q2WGJ9 1857 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 GIPC1O14908 333 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 NR1I2O75469 434 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 MMP1P03956 469 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 PDGFAP04085 211 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 XRCC6P12956 609 aaKnown RBP eCLIP6.7□□□□□ -1.34
CASC3-202ENST00000394114 PAX3P23760 479 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 MARCKSP29966 332 aaPredicted RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 FKBP1AP62942 108 aaKnown RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 SAFBQ15424 915 aaKnown RBP eCLIP6.7□□□□□ -1.34
CASC3-202ENST00000394114 MSS51Q4VC12 460 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 HOMER1Q86YM7 354 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 CDAN1Q8IWY9 1227 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 GPATCH11Q8N954 259 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 RNF214Q8ND24 703 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 SYAP1Q96A49 352 aaPredicted RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 MAF1Q9H063 256 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 VAT1LQ9HCJ6 419 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 DACT1Q9NYF0 836 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 FRMPD2Q68DX3 1309 aaPredicted RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 SIPA1L1O43166 1804 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 MYH4Q9Y623 1939 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 ESYT3A0FGR9 886 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 MAFGO15525 162 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 PRPF3O43395 683 aaKnown RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 GDF11O95390 407 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 KIF5BP33176 963 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 DLGAP5Q15398 846 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 SLC35G1Q2M3R5 365 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.7□□□□□ -1.34
CASC3-202ENST00000394114 CCSAPQ6IQ19 270 aaPredicted RBP6.7□□□□□ -1.34
CASC3-202ENST00000394114 BRAPQ7Z569 592 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 LILRB2Q8N423 598 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 TRPM4Q8TD43 1214 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 CLIP2Q9UDT6 1046 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 MAD2L2Q9UI95 211 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 RCOR1Q9UKL0 485 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
CASC3-202ENST00000394114 ADAMTS3O15072 1205 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CYTH3O43739 400 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MMP16P51512 607 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 ZNF445P59923 1031 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 GRM4Q14833 912 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PPP2R5BQ15173 497 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CCDC183Q5T5S1 534 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 ANO1Q5XXA6 986 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 HNRNPLLQ8WVV9 542 aaKnown RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 SPON2Q9BUD6 331 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 UNC93B1Q9H1C4 597 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 TCP11L1Q9NUJ3 509 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 TMEM260Q9NX78 707 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MTMR4Q9NYA4 1195 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 CNTN3Q9P232 1028 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PCDHA7Q9UN72 937 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 GJA3Q9Y6H8 435 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 KLRF2D3W0D1 207 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 PPP1R12BO60237 982 aaPredicted RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 EGFRP00533 1210 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 TOP1P11387 765 aaKnown RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 SCG2P13521 617 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 U2AF2P26368 475 aaKnown RBP eCLIP6.69□□□□□ -1.342e-8■■■□□ 16.8
CASC3-202ENST00000394114 PRELPP51888 382 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 NBPF9Q3BBW0 867 aa6.69□□□□□ -1.34
CASC3-202ENST00000394114 EARS2Q5JPH6 523 aaKnown RBP6.69□□□□□ -1.34
CASC3-202ENST00000394114 CIAPIN1Q6FI81 312 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms