RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DEFB128Q7Z7B8 93 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 AFAP1L1Q8TED9 768 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 ASB2Q96Q27 587 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 PRDM6Q9NQX0 595 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 PXMP2Q9NR77 195 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 DDX41Q9UJV9 622 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 NOD1Q9Y239 953 aa20.38■□□□□ 0.85
SNRPA1-202ENST00000394082 MYH6P13533 1939 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 LAMC2Q13753 1193 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 SEC23AQ15436 765 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 PTGISQ16647 500 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 LY6KQ17RY6 165 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 KCNV1Q6PIU1 500 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 STOX1Q6ZVD7 989 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 KAT2BQ92831 832 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 KATNAL1Q9BW62 490 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 SCN5AQ14524 2016 aa20.37■□□□□ 0.85
SNRPA1-202ENST00000394082 OPLAHO14841 1288 aa20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 NR3C2P08235 984 aa20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 HOXD8P13378 290 aaPredicted RBP20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 IGFBP4P22692 258 aa20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 MRPS5P82675 430 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 PPTC7Q8NI37 304 aa20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 CTAGE1Q96RT6 745 aa20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 TSPYL2Q9H2G4 693 aaPredicted RBP20.36■□□□□ 0.85
SNRPA1-202ENST00000394082 PALM3A6NDB9 673 aaPredicted RBP20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 KLRF2D3W0D1 207 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 ZBTB5O15062 677 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 F2P00734 622 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 MYOGP15173 224 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 STAG2Q8N3U4 1231 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 GTF2IRD1Q9UHL9 959 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
SNRPA1-202ENST00000394082 KIF28PB7ZC32 967 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 HAS3O00219 553 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 TNFRSF10AO00220 468 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 CFBP00751 764 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 CA3P07451 260 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 TGFB3P10600 412 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 SELPP16109 830 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 EIF2AK2P19525 551 aaKnown RBP20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 TRDNQ13061 729 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 GDF6Q6KF10 455 aaPredicted RBP20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 HERC6Q8IVU3 1022 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 PPM1EQ8WY54 764 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 PDCD2LQ9BRP1 358 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 FTOQ9C0B1 505 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 MRVI1Q9Y6F6 885 aa20.34■□□□□ 0.85
SNRPA1-202ENST00000394082 PPFIA4O75335 1185 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 CXCL10P02778 98 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 VSIG10LQ86VR7 867 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 RUFY2Q8WXA3 655 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 IL25Q9H293 177 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 PCDHA1Q9Y5I3 950 aa20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
SNRPA1-202ENST00000394082 PPP1R11O60927 126 aaPredicted RBP20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 GPNMBQ14956 572 aa20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 LRRC8DQ7L1W4 858 aa20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 DHX37Q8IY37 1157 aaKnown RBP20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 TET1Q8NFU7 2136 aa20.32■□□□□ 0.84
SNRPA1-202ENST00000394082 EFCAB14O75071 495 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 RGS20O76081 388 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 PSEN2P49810 448 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 PTK7Q13308 1070 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 CCDC85BQ15834 202 aaPredicted RBP20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 TTC22Q5TAA0 569 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 MYSM1Q5VVJ2 828 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 CHST3Q7LGC8 479 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 PPP1R13LQ8WUF5 828 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 DHX38Q92620 1227 aaKnown RBP20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 HDAC6Q9UBN7 1215 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 MTCH2Q9Y6C9 303 aa20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 TRIP12Q14669 1992 aaPredicted RBP20.31■□□□□ 0.84
SNRPA1-202ENST00000394082 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 CKBP12277 381 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 GSPT1P15170 499 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 KCNJ6P48051 423 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 TAP1Q03518 808 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 MFSD10Q14728 455 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 GRM4Q14833 912 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 PGM5Q15124 567 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 AAK1Q2M2I8 961 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 CNKSR3Q6P9H4 555 aa20.3■□□□□ 0.84
SNRPA1-202ENST00000394082 ABHD14A-ACY1A0A1B0GW23 586 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 ERICH2A1L162 156 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 CYP21A2P08686 494 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 CHMP4BP1P59074 171 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 WDR5P61964 334 aaKnown RBP20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 TROAPQ12815 778 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 KIAA0753Q2KHM9 967 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 ADAMTS19Q8TE59 1207 aa20.29■□□□□ 0.84
SNRPA1-202ENST00000394082 NCOR1O75376 2440 aa20.28■□□□□ 0.84
SNRPA1-202ENST00000394082 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms