RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 IGDCC4Q8TDY8 1250 aa29.67■■■□□ 2.34
KRT18-201ENST00000388835 ZNF576Q9H609 170 aa29.67■■■□□ 2.34
KRT18-201ENST00000388835 MRVI1Q9Y6F6 885 aa29.67■■■□□ 2.34
KRT18-201ENST00000388835 A0A0C4DFX4 3053 aa29.67■■■□□ 2.34
KRT18-201ENST00000388835 PDCD2LQ9BRP1 358 aa29.66■■■□□ 2.34
KRT18-201ENST00000388835 DDX41Q9UJV9 622 aaKnown RBP29.66■■■□□ 2.34
KRT18-201ENST00000388835 GBF1Q92538 1859 aa29.65■■■□□ 2.34
KRT18-201ENST00000388835 GHRHRQ02643 423 aa29.65■■■□□ 2.34
KRT18-201ENST00000388835 MYL10Q9BUA6 226 aa29.65■■■□□ 2.34
KRT18-201ENST00000388835 MAP3K20Q9NYL2 800 aaKnown RBP29.65■■■□□ 2.34
KRT18-201ENST00000388835 NOD1Q9Y239 953 aa29.65■■■□□ 2.34
KRT18-201ENST00000388835 PNMA6FA0A0J9YX94 578 aa29.64■■■□□ 2.34
KRT18-201ENST00000388835 DEFB128Q7Z7B8 93 aa29.64■■■□□ 2.34
KRT18-201ENST00000388835 FCHSD1Q86WN1 690 aa29.64■■■□□ 2.34
KRT18-201ENST00000388835 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.64■■■□□ 2.34
KRT18-201ENST00000388835 ZFP91Q96JP5 570 aaPredicted RBP29.64■■■□□ 2.34
KRT18-201ENST00000388835 LSG1Q9H089 658 aaKnown RBP29.64■■■□□ 2.34
KRT18-201ENST00000388835 EYSQ5T1H1 3165 aa29.64■■■□□ 2.34
KRT18-201ENST00000388835 GCOM1H8Y6P7 765 aaPredicted RBP29.64■■■□□ 2.33
KRT18-201ENST00000388835 SORBS3O60504 671 aa29.64■■■□□ 2.33
KRT18-201ENST00000388835 POLR2MP0CAP2 368 aa29.64■■■□□ 2.33
KRT18-201ENST00000388835 TRAF1Q13077 416 aa29.64■■■□□ 2.33
KRT18-201ENST00000388835 IL31RAQ8NI17 732 aa29.64■■■□□ 2.33
KRT18-201ENST00000388835 VWCEQ96DN2 955 aa29.64■■■□□ 2.33
KRT18-201ENST00000388835 ZBBXA8MT70 800 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 CASTP20810 708 aaKnown RBP29.63■■■□□ 2.33
KRT18-201ENST00000388835 PTPN11Q06124 597 aaPredicted RBP29.63■■■□□ 2.33
KRT18-201ENST00000388835 PGM5Q15124 567 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 CASC1Q6TDU7 716 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 SKAP1Q86WV1 359 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 ESYT1Q9BSJ8 1104 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 LY9Q9HBG7 655 aa29.63■■■□□ 2.33
KRT18-201ENST00000388835 UNC80Q8N2C7 3258 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 PRC1O43663 620 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 DHX37Q8IY37 1157 aaKnown RBP29.62■■■□□ 2.33
KRT18-201ENST00000388835 ZNF654Q8IZM8 581 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 SAMD3Q8N6K7 520 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 KAT2BQ92831 832 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 MSRAQ9UJ68 235 aa29.62■■■□□ 2.33
KRT18-201ENST00000388835 RGS20O76081 388 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 PTGISQ16647 500 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 DGKDQ16760 1214 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 RETREG2Q8NC44 543 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 SLC4A7Q9Y6M7 1214 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 TRIP12Q14669 1992 aaPredicted RBP29.61■■■□□ 2.33
KRT18-201ENST00000388835 MYO9BQ13459 2157 aa29.61■■■□□ 2.33
KRT18-201ENST00000388835 LAMC2Q13753 1193 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 RAB30Q15771 203 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 NFXL1Q6ZNB6 911 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 VSIG10LQ86VR7 867 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 CTCFLQ8NI51 663 aaPredicted RBP29.6■■■□□ 2.33
KRT18-201ENST00000388835 SLC27A2O14975 620 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 COL9A3Q14050 684 aaPredicted RBP29.6■■■□□ 2.33
KRT18-201ENST00000388835 GDF6Q6KF10 455 aaPredicted RBP29.6■■■□□ 2.33
KRT18-201ENST00000388835 ALG1Q9BT22 464 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 NKX2-4Q9H2Z4 354 aa29.6■■■□□ 2.33
KRT18-201ENST00000388835 TANC1Q9C0D5 1861 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 ZNF286BP0CG31 522 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 CCND2P30279 289 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 RABGGTBP53611 331 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 PPTC7Q8NI37 304 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 EMID1Q96A84 441 aaPredicted RBP29.59■■■□□ 2.33
KRT18-201ENST00000388835 ANO2Q9NQ90 1003 aa29.59■■■□□ 2.33
KRT18-201ENST00000388835 DDAH1O94760 285 aa29.58■■■□□ 2.33
KRT18-201ENST00000388835 PFKMP08237 780 aa29.58■■■□□ 2.33
KRT18-201ENST00000388835 MCM5P33992 734 aa29.58■■■□□ 2.33
KRT18-201ENST00000388835 BFSP2Q13515 415 aa29.58■■■□□ 2.33
KRT18-201ENST00000388835 YBX2Q9Y2T7 364 aaKnown RBP29.58■■■□□ 2.33
KRT18-201ENST00000388835 PITPNM1O00562 1244 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 IQCF3P0C7M6 154 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 KIF5BP33176 963 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 PSEN2P49810 448 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 CREB3L3Q68CJ9 461 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 GPKOWQ92917 476 aaPredicted RBP eCLIP29.57■■■□□ 2.32
KRT18-201ENST00000388835 RRP36Q96EU6 259 aaKnown RBP29.57■■■□□ 2.32
KRT18-201ENST00000388835 FTOQ9C0B1 505 aaKnown RBP eCLIP29.57■■■□□ 2.32
KRT18-201ENST00000388835 PRDM12Q9H4Q4 367 aa29.57■■■□□ 2.32
KRT18-201ENST00000388835 CCDC69A6NI79 296 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SH2B2O14492 632 aaPredicted RBP29.56■■■□□ 2.32
KRT18-201ENST00000388835 GGPS1O95749 300 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 RXRAP19793 462 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 KCNV1Q6PIU1 500 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SPATA33Q96N06 139 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 MAP3K14Q99558 947 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SPZ1Q9BXG8 430 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 HDAC6Q9UBN7 1215 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 RFC2P35250 354 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SP2Q02086 613 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 CELF3Q5SZQ8 465 aaKnown RBP29.56■■■□□ 2.32
KRT18-201ENST00000388835 MYSM1Q5VVJ2 828 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SESTD1Q86VW0 696 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 RAB11FIP4Q86YS3 637 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 C7orf31Q8N865 590 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 CTAGE1Q96RT6 745 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 SLC28A3Q9HAS3 691 aa29.56■■■□□ 2.32
KRT18-201ENST00000388835 PLEKHA8P1O95397 391 aa29.55■■■□□ 2.32
KRT18-201ENST00000388835 ATP2A2P16615 1042 aaKnown RBP29.55■■■□□ 2.32
KRT18-201ENST00000388835 UBA1P22314 1058 aaKnown RBP29.55■■■□□ 2.32
KRT18-201ENST00000388835 MFSD10Q14728 455 aa29.55■■■□□ 2.32
KRT18-201ENST00000388835 NECTIN1Q15223 517 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms