RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 MMP1P03956 469 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 CCND3P30281 292 aaPredicted RBP20.17■□□□□ 0.82
CD9-202ENST00000382515 TNFAIP2Q03169 654 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 JAKMIP3Q5VZ66 844 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 LHX8Q68G74 356 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 KRT40Q6A162 431 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 ARRDC4Q8NCT1 418 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 INPP4AQ96PE3 977 aaPredicted RBP20.17■□□□□ 0.82
CD9-202ENST00000382515 SPC25Q9HBM1 224 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 KCNJ14Q9UNX9 436 aa20.17■□□□□ 0.82
CD9-202ENST00000382515 ZSWIM8A7E2V4 1837 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 GJB2P29033 226 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 ICAM3P32942 547 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 KRT2P35908 639 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 NPY5RQ15761 445 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 DUSP28Q4G0W2 176 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 NIPA1Q7RTP0 329 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 ANKLE1Q8NAG6 615 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 GPRASP2Q96D09 838 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 SHISA4Q96DD7 197 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 DEFB118Q96PH6 123 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 NAP1L4Q99733 375 aaKnown RBP20.16■□□□□ 0.82
CD9-202ENST00000382515 WDR11Q9BZH6 1224 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 CRISPLD2Q9H0B8 497 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 OGDHLQ9ULD0 1010 aa20.16■□□□□ 0.82
CD9-202ENST00000382515 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 CENPFP49454 3210 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 CIITAP33076 1130 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 NKX3-2P78367 333 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 MRPS9P82933 396 aaKnown RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 ARHGAP4P98171 946 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 BECN1Q14457 450 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 CEP55Q53EZ4 464 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 EEPD1Q7L9B9 569 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 FBXO16Q8IX29 292 aaPredicted RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 GIMAP8Q8ND71 665 aaPredicted RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 U2AF1L4Q8WU68 220 aaKnown RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 CRYGNQ8WXF5 182 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 SENP7Q9BQF6 1050 aa20.15■□□□□ 0.82
CD9-202ENST00000382515 FOXP1Q9H334 677 aaPredicted RBP20.15■□□□□ 0.82
CD9-202ENST00000382515 CCDC194A0A1B0GVG4 234 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 SPATA31C2B4DYI2 1134 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 FIBPO43427 364 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 TFRCP02786 760 aaKnown RBP20.14■□□□□ 0.81
CD9-202ENST00000382515 ZNF76P36508 570 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 NONOQ15233 471 aaKnown RBP eCLIP20.14■□□□□ 0.81
CD9-202ENST00000382515 LARP1BQ659C4 914 aaKnown RBP20.14■□□□□ 0.81
CD9-202ENST00000382515 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 JADE2Q9NQC1 790 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 TMEM260Q9NX78 707 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 GNEQ9Y223 722 aaKnown RBP20.14■□□□□ 0.81
CD9-202ENST00000382515 UBIAD1Q9Y5Z9 338 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 MYH6P13533 1939 aa20.14■□□□□ 0.81
CD9-202ENST00000382515 CCDC85CA6NKD9 419 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 HSP90AA1P07900 732 aaKnown RBP20.13■□□□□ 0.81
CD9-202ENST00000382515 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
CD9-202ENST00000382515 ADCYAP1R1P41586 468 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 NEDD9Q14511 834 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 BRDTQ58F21 947 aaPredicted RBP20.13■□□□□ 0.81
CD9-202ENST00000382515 MOXD1Q6UVY6 613 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 RNF180Q86T96 592 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 DIS3L2Q8IYB7 885 aaKnown RBP20.13■□□□□ 0.81
CD9-202ENST00000382515 MXRA8Q9BRK3 442 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 AP5M1Q9H0R1 490 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
CD9-202ENST00000382515 MRVI1Q9Y6F6 885 aa20.13■□□□□ 0.81
CD9-202ENST00000382515 MEIS1O00470 390 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 RGS20O76081 388 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
CD9-202ENST00000382515 GJA9P57773 515 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 TBCKQ8TEA7 893 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 XPNPEP3Q9NQH7 507 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 GJB4Q9NTQ9 266 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 RTEL1Q9NZ71 1219 aa20.12■□□□□ 0.81
CD9-202ENST00000382515 CYP3A7-CYP3A51PA0A087WV96 503 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 BTBD18B2RXH4 712 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 H3BQV1 296 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 ZEB2O60315 1214 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 SMPD1P17405 629 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 CYP3A7P24462 503 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 MTMR1Q13613 665 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 LAMC2Q13753 1193 aa20.11■□□□□ 0.81
CD9-202ENST00000382515 EMID1Q96A84 441 aaPredicted RBP20.11■□□□□ 0.81
CD9-202ENST00000382515 TSEN34Q9BSV6 310 aaKnown RBP20.11■□□□□ 0.81
CD9-202ENST00000382515 UPF3AQ9H1J1 476 aaKnown RBP20.11■□□□□ 0.81
CD9-202ENST00000382515 KPNA6O60684 536 aa20.1■□□□□ 0.81
CD9-202ENST00000382515 GH1P01241 217 aa20.1■□□□□ 0.81
CD9-202ENST00000382515 GCFC2P16383 781 aaKnown RBP20.1■□□□□ 0.81
CD9-202ENST00000382515 ITGB5P18084 799 aa20.1■□□□□ 0.81
CD9-202ENST00000382515 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.81
CD9-202ENST00000382515 SETQ01105 290 aaPredicted RBP20.1■□□□□ 0.81
CD9-202ENST00000382515 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
CD9-202ENST00000382515 PPP4R3AQ6IN85 833 aa20.1■□□□□ 0.81
CD9-202ENST00000382515 PCSK9Q8NBP7 692 aaKnown RBP20.1■□□□□ 0.81
CD9-202ENST00000382515 RASGRP4Q8TDF6 673 aa20.1■□□□□ 0.81
CD9-202ENST00000382515 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms