RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 CDC6Q99741 560 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 SLC26A6Q9BXS9 759 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 SLC52A2Q9HAB3 445 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 GPRC5BQ9NZH0 403 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PTPN22Q9Y2R2 807 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA9Q9Y5G4 932 aaKnown RBP6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA8Q9Y5G5 932 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA7Q9Y5G6 932 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA6Q9Y5G7 932 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA3Q9Y5H0 932 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 PCDHGA2Q9Y5H1 932 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 RAD50Q92878 1312 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 SYNJ2O15056 1496 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 GPATCH8Q9UKJ3 1502 aaKnown RBP6.98□□□□□ -1.29
SREK1-203ENST00000380918 TCHHQ07283 1943 aa6.98□□□□□ -1.29
SREK1-203ENST00000380918 POTECB2RU33 542 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SUSD5O60279 629 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 BRINP1O60477 761 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 PLOD3O60568 738 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SLU7O95391 586 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 NUP153P49790 1475 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 TPM4P67936 248 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 AP3B2Q13367 1082 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 IQGAP2Q13576 1575 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 DHCR24Q15392 516 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 ASIC2Q16515 512 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 DDB1Q16531 1140 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 FNDC3BQ53EP0 1204 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 PEAR1Q5VY43 1037 aaPredicted RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 TRIM42Q8IWZ5 723 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SCUBE3Q8IX30 993 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 STK11IPQ8N1F8 1099 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 LRRN4CLQ8ND94 238 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 UBXN10Q96LJ8 280 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SUV39H2Q9H5I1 410 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 RASSF1Q9NS23 344 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 CWC15Q9P013 229 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 SNCAIPQ9Y6H5 919 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 TOPBP1Q92547 1522 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 FAM221AA4D161 298 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 HTATSF1O43719 755 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 VAMP4O75379 141 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SLC4A1P02730 911 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 CUL4AQ13619 759 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 INAVAQ3KP66 663 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 FASTKD5Q7L8L6 764 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 TEX11Q8IYF3 940 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 CACTINQ8WUQ7 758 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 USP7Q93009 1102 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 SLC4A9Q96Q91 983 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 NUDT16L1Q9BRJ7 211 aaKnown RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 PHACTR1Q9C0D0 580 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
SREK1-203ENST00000380918 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
SREK1-203ENST00000380918 PRG4Q92954 1404 aaPredicted RBP6.96□□□□□ -1.29
SREK1-203ENST00000380918 CFAP65Q6ZU64 1925 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 TBX18O95935 607 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 XPAP23025 273 aaPredicted RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 TUBP50607 506 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 UBE2HP62256 183 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 ERCC6LQ2NKX8 1250 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 IQSEC1Q6DN90 963 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 NBPF10Q6P3W6 841 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 TMCO3Q6UWJ1 677 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 LUZP1Q86V48 1076 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 STAG2Q8N3U4 1231 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 NAT8LQ8N9F0 302 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 SLC35G2Q8TBE7 412 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 SEC62Q99442 399 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 TCF7L1Q9HCS4 588 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 TBC1D22BQ9NU19 505 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 ARHGEF5Q12774 1597 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 SYNRGQ9UMZ2 1314 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 RTCAO00442 366 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 DNTTP04053 509 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 ARAFP10398 606 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 FOSL1P15407 271 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 ZNF132P52740 706 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 PSMC1P62191 440 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 ERVK-9P63128 1117 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 RTN1Q16799 776 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 INTS11Q5TA45 600 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 SIRT2Q8IXJ6 389 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 CCDC144CPQ8IYA2 1237 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 HSPBAP1Q96EW2 488 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 SCLYQ96I15 445 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 SPAG5Q96R06 1193 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 UNKQ9C0B0 810 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 IFT22Q9H7X7 185 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 BRD9Q9H8M2 597 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 ATP8A2Q9NTI2 1148 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 INTS7Q9NVH2 962 aaKnown RBP6.96□□□□□ -1.3
SREK1-203ENST00000380918 DONSONQ9NYP3 566 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 RTEL1Q9NZ71 1219 aa6.96□□□□□ -1.3
SREK1-203ENST00000380918 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms