RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 EDIL3O43854 480 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 U2AF2P26368 475 aaKnown RBP eCLIP14.46□□□□□ -0.1
SMN1-202ENST00000380707 ARHGAP4P98171 946 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 STXBP2Q15833 593 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 MFSD14CQ5VZR4 134 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 MCTP1Q6DN14 999 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 EEPD1Q7L9B9 569 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 KRT25Q7Z3Z0 450 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 TRPV1Q8NER1 839 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 TBCKQ8TEA7 893 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 MPHOSPH6Q99547 160 aaKnown RBP14.46□□□□□ -0.1
SMN1-202ENST00000380707 EHMT1Q9H9B1 1298 aa14.46□□□□□ -0.1
SMN1-202ENST00000380707 MCM3APO60318 1980 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 STX6O43752 255 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 EIF3JO75822 258 aaKnown RBP14.45□□□□□ -0.1
SMN1-202ENST00000380707 RGS20O76081 388 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 INHAP05111 366 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
SMN1-202ENST00000380707 CCND2P30279 289 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 GNL2Q13823 731 aaKnown RBP14.45□□□□□ -0.1
SMN1-202ENST00000380707 NONOQ15233 471 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMN1-202ENST00000380707 INF2Q27J81 1249 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 MAP3K21Q5TCX8 1036 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 NOSTRINQ8IVI9 506 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 FBXO16Q8IX29 292 aaPredicted RBP14.45□□□□□ -0.1
SMN1-202ENST00000380707 MCOLN1Q9GZU1 580 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 RTEL1Q9NZ71 1219 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 CNPY2Q9Y2B0 182 aa14.45□□□□□ -0.1
SMN1-202ENST00000380707 CYP3A4P08684 503 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 ZNF865P0CJ78 1059 aaPredicted RBP14.44□□□□□ -0.1
SMN1-202ENST00000380707 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 PKP1Q13835 747 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 TAPT1Q6NXT6 567 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 XRRA1Q6P2D8 792 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 CYP2W1Q8TAV3 490 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 ABHD16BQ9H3Z7 469 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 PDGFCQ9NRA1 345 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 MTMR6Q9Y217 621 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 MKI67P46013 3256 aaKnown RBP14.44□□□□□ -0.1
SMN1-202ENST00000380707 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
SMN1-202ENST00000380707 CYBAP13498 195 aa14.43□□□□□ -0.1
SMN1-202ENST00000380707 ITGB5P18084 799 aa14.43□□□□□ -0.1
SMN1-202ENST00000380707 COL13A1Q5TAT6 717 aaPredicted RBP14.43□□□□□ -0.1
SMN1-202ENST00000380707 FERMT3Q86UX7 667 aa14.43□□□□□ -0.1
SMN1-202ENST00000380707 VTA1Q9NP79 307 aa14.43□□□□□ -0.1
SMN1-202ENST00000380707 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
SMN1-202ENST00000380707 ZHX1Q9UKY1 873 aaPredicted RBP14.43□□□□□ -0.1
SMN1-202ENST00000380707 MYH7BA7E2Y1 1941 aa14.43□□□□□ -0.1
SMN1-202ENST00000380707 FAM86B1E9PN63 330 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 STAM2O75886 525 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 FAM86B2P0C5J1 330 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 CCND3P30281 292 aaPredicted RBP14.42□□□□□ -0.1
SMN1-202ENST00000380707 USP11P51784 963 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 CCDC144BQ3MJ40 725 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 CEP55Q53EZ4 464 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 INPP4AQ96PE3 977 aaPredicted RBP14.42□□□□□ -0.1
SMN1-202ENST00000380707 WDR11Q9BZH6 1224 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 NRBP1Q9UHY1 535 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 UBIAD1Q9Y5Z9 338 aa14.42□□□□□ -0.1
SMN1-202ENST00000380707 RBM47A0AV96 593 aaKnown RBP14.41□□□□□ -0.1
SMN1-202ENST00000380707 WNT7AO00755 349 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
SMN1-202ENST00000380707 ZNF76P36508 570 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 MTFR1Q15390 333 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 LETM2Q2VYF4 491 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 TMEM63BQ5T3F8 832 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 NEK8Q86SG6 692 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 ARMC5Q96C12 935 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 ZNF333Q96JL9 665 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 MXRA8Q9BRK3 442 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 IGLV3-22A0A075B6J6 115 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 CYP3A7-CYP3A51PA0A087WV96 503 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
SMN1-202ENST00000380707 MEIS1O00470 390 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 ADCY6O43306 1168 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 ARIH2O95376 493 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 TDP2O95551 362 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 CYP3A7P24462 503 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 CNGA1P29973 690 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 CIITAP33076 1130 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 DDIT3P35638 169 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 ADCYAP1R1P41586 468 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 TOB1P50616 345 aaPredicted RBP14.41□□□□□ -0.1
SMN1-202ENST00000380707 SEMA3FQ13275 785 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
SMN1-202ENST00000380707 SPATA31C2B4DYI2 1134 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 SEPT4O43236 478 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 CCNT1O60563 726 aaKnown RBP14.4□□□□□ -0.1
SMN1-202ENST00000380707 ZSCAN22P10073 491 aaPredicted RBP14.4□□□□□ -0.1
SMN1-202ENST00000380707 PDIA4P13667 645 aaKnown RBP14.4□□□□□ -0.1
SMN1-202ENST00000380707 ATP2B1P20020 1258 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 PTGS1P23219 599 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 SP2Q02086 613 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 RESTQ13127 1097 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 LY6KQ17RY6 165 aa14.4□□□□□ -0.1
SMN1-202ENST00000380707 GNPTABQ3T906 1256 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms