RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PANK4Q9NVE7 773 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 CAPN6Q9Y6Q1 641 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 XIRP1Q702N8 1843 aaKnown RBP14.34□□□□□ -0.11
USP11-204ENST00000377107 LAD1O00515 517 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 ATP2B4P23634 1241 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 ZNF76P36508 570 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 DCAF17Q5H9S7 520 aaPredicted RBP14.34□□□□□ -0.11
USP11-204ENST00000377107 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 TBC1D16Q8TBP0 767 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
USP11-204ENST00000377107 BCL9LQ86UU0 1499 aa14.34□□□□□ -0.11
USP11-204ENST00000377107 POTEB3A0JP26 581 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 POTECB2RU33 542 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 SLC1A4P43007 532 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 NOP2P46087 812 aaKnown RBP14.33□□□□□ -0.11
USP11-204ENST00000377107 PDE4CQ08493 712 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 PRR16Q569H4 304 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 POTEBQ6S5H4 581 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 COG1Q8WTW3 980 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.11
USP11-204ENST00000377107 FAM204AQ9H8W3 233 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 PCDHA13Q9Y5I0 950 aa14.33□□□□□ -0.11
USP11-204ENST00000377107 PDE2AO00408 941 aaPredicted RBP14.33□□□□□ -0.12
USP11-204ENST00000377107 GDF11O95390 407 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 FTCDO95954 541 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 GPBP1Q86WP2 473 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 DNAJC7Q99615 494 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
USP11-204ENST00000377107 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 PCDHAC2Q9Y5I4 1007 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 GPR75-ASB3A0A0A6YYF3 556 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 CHMP2AO43633 222 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 MRPL12P52815 198 aaKnown RBP14.33□□□□□ -0.12
USP11-204ENST00000377107 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
USP11-204ENST00000377107 PABPC4Q13310 644 aaKnown RBP eCLIP14.33□□□□□ -0.122e-11■■■■□ 21.4
USP11-204ENST00000377107 ALS2CR12Q96Q35 445 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 RUFY1Q96T51 708 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
USP11-204ENST00000377107 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
USP11-204ENST00000377107 ATP8B1O43520 1251 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PAFAH1B1P43034 410 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PPP4CP60510 307 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 NFIAQ12857 509 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 FAM26FQ5R3K3 315 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PROCA1Q8NCQ7 364 aaPredicted RBP14.32□□□□□ -0.12
USP11-204ENST00000377107 CUL5Q93034 780 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 MS4A14Q96JA4 679 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PNMA5Q96PV4 448 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 MYO1AQ9UBC5 1043 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 ECM29Q5VYK3 1845 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 M0R2N6 131 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 FGFR1OPO95684 399 aaKnown RBP14.32□□□□□ -0.12
USP11-204ENST00000377107 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 MAP9Q49MG5 647 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 C7orf25Q9BPX7 421 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 ARHGAP20Q9P2F6 1191 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 SFI1A8K8P3 1242 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PRPHP41219 470 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 RHBDL3P58872 404 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 UBXN2AP68543 259 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 PLS1Q14651 629 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 JMJD4Q9H9V9 463 aa14.32□□□□□ -0.12
USP11-204ENST00000377107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP11-204ENST00000377107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP11-204ENST00000377107 ESYT3A0FGR9 886 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 RNF40O75150 1001 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 TTLL1O95922 423 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
USP11-204ENST00000377107 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
USP11-204ENST00000377107 ECM1Q16610 540 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 MIIPQ5JXC2 388 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 UNC13DQ70J99 1090 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 TRAPPC11Q7Z392 1133 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 SPAG5Q96R06 1193 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 CUEDC2Q9H467 287 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 POTEFA5A3E0 1075 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 TRIM37O94972 964 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 VAV2P52735 878 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 USP14P54578 494 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 TUBB2AQ13885 445 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 MAN2A1Q16706 1144 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 RC3H1Q5TC82 1133 aaKnown RBP14.31□□□□□ -0.12
USP11-204ENST00000377107 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 RAD54LQ92698 747 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 TUBB2BQ9BVA1 445 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 FGFBP2Q9BYJ0 223 aa14.31□□□□□ -0.12
USP11-204ENST00000377107 GOLPH3Q9H4A6 298 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms