RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 SLC39A2Q9NP94 309 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CAND2O75155 1236 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 DDAH1O94760 285 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 STARD3NLO95772 234 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 TCP1P17987 556 aaKnown RBP12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 MAGEA1P43355 309 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 PTGISQ16647 500 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 B4GALNT4Q76KP1 1039 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 LRP5O75197 1615 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 FLT1P17948 1338 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 A0A1W2PQJ5 194 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 FTCDO95954 541 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 IL2RBP14784 551 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 NR1D1P20393 614 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 ASIC1P78348 528 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 IFT88Q13099 833 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 SUSD4Q5VX71 490 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 CCT8L2Q96SF2 557 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 GDF3Q9NR23 364 aa12.71□□□□□ -0.37
TM9SF2-201ENST00000376387 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 BACH1O14867 736 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 CALM1P0DP23 149 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 CALM2P0DP24 149 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 CALM3P0DP25 149 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 PAFAH1B1P43034 410 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 TXNRD1Q16881 649 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 ZC3H12AQ5D1E8 599 aaKnown RBP12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 TMCO4Q5TGY1 634 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 NLRP14Q86W24 1093 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 OR2W6PQ8NHA6 318 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 KRT12Q99456 494 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 TRIM9Q9C026 710 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.38
TM9SF2-201ENST00000376387 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 NOC3LQ8WTT2 800 aaKnown RBP12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 MYH1P12882 1939 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 PPP1R37O75864 691 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 LCA5LO95447 670 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 FIGNQ5HY92 759 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 C1QTNF12Q5T7M4 302 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 CENPHQ9H3R5 247 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 PPANQ9NQ55 473 aaKnown RBP12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
TM9SF2-201ENST00000376387 M0R2N6 131 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 PAX7P23759 505 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 TNFRSF8P28908 595 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CHRNDQ07001 517 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 BAP1Q92560 729 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 NDST4Q9H3R1 872 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CACNA1SQ13698 1873 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 E7EVH7 732 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 ACTN3Q08043 901 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 SF3B2Q13435 895 aaKnown RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 PTPROQ16827 1216 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CABP7Q86V35 215 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CCDC13Q8IYE1 715 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 GLIS3Q8NEA6 775 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 PALMO75781 387 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 MDH1P40925 334 aaKnown RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 ITGB3BPQ13352 177 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 ASTE1Q2TB18 679 aaPredicted RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 RUBCNQ92622 972 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.69□□□□□ -0.38
TM9SF2-201ENST00000376387 FGRP09769 529 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 CPVLQ9H3G5 476 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 ATXN2Q99700 1313 aaKnown RBP12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 BICDL2A1A5D9 508 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 USP8P40818 1118 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 QPCTQ16769 361 aa12.68□□□□□ -0.38
TM9SF2-201ENST00000376387 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms