RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
PTPN20-204ENST00000374346 SSU72P8A0A1W2PR75 194 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC53A6NM62 1247 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 MAGEA1P43355 309 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 C2orf54Q08AI8 447 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 CREG2Q8IUH2 290 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 MYOCDQ8IZQ8 938 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 RPGRQ92834 1020 aaKnown RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 HPS3Q969F9 1004 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 CD209Q9NNX6 404 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 ZNF263O14978 683 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 GNA14O95837 355 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 PDHBP11177 359 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 ATP2B4P23634 1241 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 NOVP48745 357 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 FKBP3Q00688 224 aaKnown RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 NFIXQ14938 502 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 PPP4R3AQ6IN85 833 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 SRLQ86TD4 932 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 DDX12PQ92771 950 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 ARHGEF1Q92888 912 aaKnown RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 OSBPL9Q96SU4 736 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 NAP1L4Q99733 375 aaKnown RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 RNF14Q9UBS8 474 aa12.64□□□□□ -0.39
PTPN20-204ENST00000374346 CCNL1Q9UK58 526 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-204ENST00000374346 MYO1CO00159 1063 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 PDE2AO00408 941 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 PJA2O43164 708 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 MOCS3O95396 460 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 NAP1L1P55209 391 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 SPATA4Q8NEY3 305 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 FAM76AQ8TAV0 307 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 PNMA5Q96PV4 448 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 RRP15Q9Y3B9 282 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 CAPN6Q9Y6Q1 641 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 TNRC6CQ9HCJ0 1690 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 OPA1O60313 960 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 ZMYND10O75800 440 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 UFL1O94874 794 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 IL1R1P14778 569 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 GGCXP38435 758 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 GRIK5Q16478 980 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 CCDC40Q4G0X9 1142 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 GLE1Q53GS7 698 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 TDRD12Q587J7 1177 aaKnown RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 SYN2Q92777 582 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-204ENST00000374346 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 RUFY1Q96T51 708 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 COL4A3BPQ9Y5P4 624 aa12.63□□□□□ -0.39
PTPN20-204ENST00000374346 POTEMA6NI47 508 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 TNNI2P48788 182 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 EPHB4P54760 987 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 PDXDC1Q6P996 788 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 EMBQ6PCB8 327 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 MTMR4Q9NYA4 1195 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 CEP72Q9P209 647 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 FEZ2Q9UHY8 353 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 SLC37A4O43826 429 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 TDP2O95551 362 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 TMEM119Q4V9L6 283 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 SFMBT2Q5VUG0 894 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 LRRC55Q6ZSA7 311 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-204ENST00000374346 CUL5Q93034 780 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 COA7Q96BR5 231 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 CEP63Q96MT8 703 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GDAP1L1Q96MZ0 367 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
PTPN20-204ENST00000374346 STIM2Q9P246 746 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms