RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CUL5Q93034 780 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 SLC26A6Q9BXS9 759 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 GJB4Q9NTQ9 266 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 ZNHIT6Q9NWK9 470 aaKnown RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF330Q9Y3S2 320 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-201ENST00000373386 SLC4A4Q9Y6R1 1079 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 MYH2Q9UKX2 1941 aa9.08□□□□□ -0.96
GARNL3-201ENST00000373386 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 DIS3L2Q8IYB7 885 aaKnown RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 GBP7Q8N8V2 638 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 PHKBQ93100 1093 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 HPS3Q969F9 1004 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 LUC7LQ9NQ29 371 aaKnown RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ITGB1BP2Q9UKP3 347 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 MAFFQ9ULX9 164 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 INPP5BP32019 993 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 TRAPPC10P48553 1259 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 MAP3K9P80192 1104 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 DMPKQ09013 629 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 KCNB1Q14721 858 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ENOX2Q16206 610 aaKnown RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 MTHFD1LQ6UB35 978 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF654Q8IZM8 581 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 LCORLQ8N3X6 602 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 MAB21L3Q8N8X9 362 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 CLIP3Q96DZ5 547 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ARMT1Q9H993 441 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 IP6K2Q9UHH9 426 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ZNF510Q9Y2H8 683 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 CCDC88AQ3V6T2 1871 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 TMEM232C9JQI7 657 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 SLC26A4O43511 780 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 ORC4O43929 436 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 SKAP2O75563 359 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 CHRNDQ07001 517 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 FUT2Q10981 343 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 NANOGNBQ7Z5D8 188 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
GARNL3-201ENST00000373386 AIFM3Q96NN9 605 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 PHF20Q9BVI0 1012 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 CROTQ9UKG9 612 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
GARNL3-201ENST00000373386 FANCGO15287 622 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 ALOX15P16050 662 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-201ENST00000373386 PPP2R3AQ06190 1150 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 TMEM62Q0P6H9 643 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 SPECC1LQ69YQ0 1117 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 LMBR1Q8WVP7 490 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 RABGGTAQ92696 567 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 CD248Q9HCU0 757 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 TMEM221A6NGB7 291 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
GARNL3-201ENST00000373386 KDM1AO60341 852 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 SIK1P57059 783 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 ARPC4P59998 168 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 GNG11P61952 73 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 ARHGEF6Q15052 776 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 CNGA3Q16281 694 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 THEMIS2Q5TEJ8 643 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 RSRC2Q7L4I2 434 aaKnown RBP9.06□□□□□ -0.96
GARNL3-201ENST00000373386 SREK1Q8WXA9 508 aaKnown RBP9.06□□□□□ -0.96
GARNL3-201ENST00000373386 GORASP1Q9BQQ3 440 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 UBAC1Q9BSL1 405 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 INTS13Q9NVM9 706 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 ADAM21Q9UKJ8 722 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 SSX2IPQ9Y2D8 614 aa9.06□□□□□ -0.96
GARNL3-201ENST00000373386 MAGEB6P1A0A0J9YX57 407 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TBCAO75347 108 aaKnown RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 RNF8O76064 485 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 PAPOLAP51003 745 aaKnown RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 MYBPC3Q14896 1274 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 ARFGAP3Q9NP61 516 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 MAN1B1Q9UKM7 699 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 CNTNAP4Q9C0A0 1308 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 COL1A1P02452 1464 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-201ENST00000373386 FRMD3A2A2Y4 597 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 BTBD18B2RXH4 712 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 TBC1D8O95759 1140 aa9.05□□□□□ -0.96
GARNL3-201ENST00000373386 EZRP15311 586 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms