RNA–Protein interactions for RNA: ENST00000372274.5

TMEM254-202, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-202ENST00000372274 ANTXR2P58335 489 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 RAB30Q15771 203 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
TMEM254-202ENST00000372274 MSRAQ9UJ68 235 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
TMEM254-202ENST00000372274 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-202ENST00000372274 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 HOXA13P31271 388 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-202ENST00000372274 RFC2P35250 354 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 BFSP2Q13515 415 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 PGM5Q15124 567 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 DGKDQ16760 1214 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 KCNV1Q6PIU1 500 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 KAT2BQ92831 832 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 MTA3Q9BTC8 594 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 NOD1Q9Y239 953 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 SLC4A7Q9Y6M7 1214 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
TMEM254-202ENST00000372274 RGS20O76081 388 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
TMEM254-202ENST00000372274 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 PTGISQ16647 500 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 DEFB128Q7Z7B8 93 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
TMEM254-202ENST00000372274 PPTC7Q8NI37 304 aa13.2□□□□□ -0.3
TMEM254-202ENST00000372274 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
TMEM254-202ENST00000372274 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 DDAH1O94760 285 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 TGFB3P10600 412 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 ACTN1P12814 892 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
TMEM254-202ENST00000372274 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 CCND2P30279 289 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 CELF3Q5SZQ8 465 aaKnown RBP13.19□□□□□ -0.3
TMEM254-202ENST00000372274 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 GDF6Q6KF10 455 aaPredicted RBP13.19□□□□□ -0.3
TMEM254-202ENST00000372274 CASC1Q6TDU7 716 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 FCHSD1Q86WN1 690 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 CAGE1Q8TC20 777 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 SPZ1Q9BXG8 430 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 LY9Q9HBG7 655 aa13.19□□□□□ -0.3
TMEM254-202ENST00000372274 YBX2Q9Y2T7 364 aaKnown RBP13.19□□□□□ -0.3
TMEM254-202ENST00000372274 HAS3O00219 553 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 SLC27A2O14975 620 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 PRC1O43663 620 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 F2P00734 622 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
TMEM254-202ENST00000372274 KIF5BP33176 963 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 MCM5P33992 734 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 PSEN2P49810 448 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 GNAQP50148 359 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 CTCFLQ8NI51 663 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-202ENST00000372274 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-202ENST00000372274 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 COL25A1Q9BXS0 654 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-202ENST00000372274 PRDM12Q9H4Q4 367 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 PCDHA11Q9Y5I1 949 aa13.18□□□□□ -0.3
TMEM254-202ENST00000372274 CDH23Q9H251 3354 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-202ENST00000372274 STAM2O75886 525 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 GGPS1O95749 300 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 RABGGTBP53611 331 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 SP2Q02086 613 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 RBL2Q08999 1139 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 MFSD10Q14728 455 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 HSDL1Q3SXM5 330 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 CREB3L3Q68CJ9 461 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
TMEM254-202ENST00000372274 SPATA33Q96N06 139 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
TMEM254-202ENST00000372274 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms