RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SPATA5Q8NB90 893 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MYCBPAPQ8TBZ2 947 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 LPIN2Q92539 896 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CNOT6LQ96LI5 555 aaKnown RBP6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC42Q96M95 316 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 TLR10Q9BXR5 811 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 OSBPL7Q9BZF2 842 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 KLC4Q9NSK0 619 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 CAPN11Q9UMQ6 739 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 HYOU1Q9Y4L1 999 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 PCDHA13Q9Y5I0 950 aa6.01□□□□□ -1.45
ATG4A-204ENST00000372246 MYH10P35580 1976 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 LRRC53A6NM62 1247 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 FOXO6A8MYZ6 492 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 GNPATO15228 680 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 NEBLO76041 1014 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 CIAO1O76071 339 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 GOLGA8HP0CJ92 632 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 NR1D1P20393 614 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 LIFRP42702 1097 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 PTGISQ16647 500 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 NAIF1Q69YI7 327 aaPredicted RBP6□□□□□ -1.45
ATG4A-204ENST00000372246 KANK3Q6NY19 840 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 DYMQ7RTS9 669 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 ANKLE2Q86XL3 938 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 STAG2Q8N3U4 1231 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 FBXO41Q8TF61 875 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 NOC4LQ9BVI4 516 aaKnown RBP6□□□□□ -1.45
ATG4A-204ENST00000372246 TRIM31Q9BZY9 425 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 TTYH3Q9C0H2 523 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 TMEM134Q9H6X4 195 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 STIM2Q9P246 746 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 PLAAQ9Y263 795 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 L3MBTL1Q9Y468 752 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 RGPD5Q99666 1765 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 ARFGEF2Q9Y6D5 1785 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 KLRC4O43908 158 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 AKR1B10O60218 316 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 KIF11P52732 1056 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 EHHADHQ08426 723 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 HLTFQ14527 1009 aaKnown RBP eCLIP6□□□□□ -1.45
ATG4A-204ENST00000372246 INF2Q27J81 1249 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC40Q4G0X9 1142 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 CFAP58Q5T655 872 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 KLHDC7AQ5VTJ3 777 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 TTI2Q6NXR4 508 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 NLRP14Q86W24 1093 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 DZIP3Q86Y13 1208 aaKnown RBP6□□□□□ -1.45
ATG4A-204ENST00000372246 VGLL2Q8N8G2 317 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 GIMAP7Q8NHV1 300 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 RBM46Q8TBY0 533 aaKnown RBP6□□□□□ -1.45
ATG4A-204ENST00000372246 TNFRSF25Q93038 417 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC51Q96ER9 411 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 DCAF5Q96JK2 942 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 EXOC1Q9NV70 894 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 TBC1D7Q9P0N9 293 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 LRP2BPQ9P2M1 347 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 MYO1AQ9UBC5 1043 aa6□□□□□ -1.45
ATG4A-204ENST00000372246 TPX2Q9ULW0 747 aaKnown RBP6□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC189A1A4V9 331 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 TARSL2A2RTX5 802 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 EME2A4GXA9 379 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 NUTM2BA6NNL0 878 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 NUTM2EB1AL46 878 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 RAD51CO43502 376 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PALMO75781 387 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PDE8BO95263 885 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SRGNP10124 158 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CYP7A1P22680 504 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 DNAJB2P25686 324 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 ELF1P32519 619 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 GYG1P46976 350 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 VAV2P52735 878 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 ATP2C1P98194 919 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 DHX9Q08211 1270 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SEMA3FQ13275 785 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 LLGL1Q15334 1064 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SEC23AQ15436 765 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 TDRD12Q587J7 1177 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 IFIT1BQ5T764 474 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 MSL3Q8N5Y2 521 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PXYLP1Q8TE99 480 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 THOC1Q96FV9 657 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CCDC114Q96M63 670 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SH2D4AQ9H788 454 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 DONSONQ9NYP3 566 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 TRMT112Q9UI30 125 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 ODF2LQ9ULJ1 636 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CEP131Q9UPN4 1083 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 IRS4O14654 1257 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 ITGA4P13612 1032 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PEX19P40855 299 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 EPHB4P54760 987 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 KRT83P78385 493 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 SATB1Q01826 763 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 CKAP4Q07065 602 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 PDE4DQ08499 809 aa5.99□□□□□ -1.45
ATG4A-204ENST00000372246 BYSLQ13895 437 aaKnown RBP5.99□□□□□ -1.45
ATG4A-204ENST00000372246 UBE3CQ15386 1083 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms