RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
NEK2-201ENST00000366998 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
NEK2-201ENST00000366998 LENG9Q96B70 501 aa16.81■□□□□ 0.28
NEK2-201ENST00000366998 ATG4CQ96DT6 458 aa16.81■□□□□ 0.28
NEK2-201ENST00000366998 C12orf42Q96LP6 360 aa16.81■□□□□ 0.28
NEK2-201ENST00000366998 XPO4Q9C0E2 1151 aaKnown RBP16.81■□□□□ 0.28
NEK2-201ENST00000366998 CTNND2Q9UQB3 1225 aa16.81■□□□□ 0.28
NEK2-201ENST00000366998 PPP1R3GB7ZBB8 358 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
NEK2-201ENST00000366998 SERPINC1P01008 464 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 TPM3P06753 285 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 STAT3P40763 770 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 STX17P56962 302 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 MAP3K9P80192 1104 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 MCM6Q14566 821 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 HSP90AA4PQ58FG1 418 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 MCF2L2Q86YR7 1114 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 BLOC1S4Q9NUP1 217 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 RLFQ13129 1914 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 MSH4O15457 936 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 KLRC4O43908 158 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 FDX1P10109 184 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 HSD17B4P51659 736 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 VGLL4Q14135 290 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 KCNB1Q14721 858 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 NCAPH2Q6IBW4 605 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 RAD54LQ92698 747 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 L3MBTL3Q96JM7 780 aaPredicted RBP16.8■□□□□ 0.28
NEK2-201ENST00000366998 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 C7orf25Q9BPX7 421 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
NEK2-201ENST00000366998 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 CSADQ9Y600 493 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 SNCAIPQ9Y6H5 919 aa16.8■□□□□ 0.28
NEK2-201ENST00000366998 VWA5AO00534 786 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
NEK2-201ENST00000366998 PTGS1P23219 599 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 EPHX2P34913 555 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 ECM1Q16610 540 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 MUM1L1Q5H9M0 696 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
NEK2-201ENST00000366998 USP50Q70EL3 339 aaPredicted RBP16.79■□□□□ 0.28
NEK2-201ENST00000366998 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 CCDC186Q7Z3E2 898 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 NT5C3AQ9H0P0 336 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 PNMA2Q9UL42 364 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 PTPRFP10586 1907 aa16.79■□□□□ 0.28
NEK2-201ENST00000366998 IGLV3-22A0A075B6J6 115 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
NEK2-201ENST00000366998 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 WNK4Q96J92 1243 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 MED15Q96RN5 788 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 MAPK8IP1Q9UQF2 711 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 POTEB3A0JP26 581 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 POTECB2RU33 542 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 RHOBTB3O94955 611 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 NF2P35240 595 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 IREB2P48200 963 aaKnown RBP16.78■□□□□ 0.28
NEK2-201ENST00000366998 UBASH3AP57075 661 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 PDE4DQ08499 809 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 PAK1Q13153 545 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 SPATA1Q5VX52 437 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 POTEBQ6S5H4 581 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 KCNK18Q7Z418 384 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
NEK2-201ENST00000366998 TRERF1Q96PN7 1200 aa16.78■□□□□ 0.28
NEK2-201ENST00000366998 SAMSN1Q9NSI8 373 aaKnown RBP16.78■□□□□ 0.28
NEK2-201ENST00000366998 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.28
NEK2-201ENST00000366998 MYMKA6NI61 221 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 SLC26A4O43511 780 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 DSG3P32926 999 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 PRCPP42785 496 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 SPIRE1Q08AE8 756 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 SEMA3FQ13275 785 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 STIM1Q13586 685 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 COG2Q14746 738 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 CEP55Q53EZ4 464 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 HYIQ5T013 277 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 NELFBQ8WX92 580 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 LRRC27Q9C0I9 530 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 COL20A1Q9P218 1284 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.27
NEK2-201ENST00000366998 COBLO75128 1261 aa16.76■□□□□ 0.27
NEK2-201ENST00000366998 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
NEK2-201ENST00000366998 TTLL12Q14166 644 aaPredicted RBP16.76■□□□□ 0.27
NEK2-201ENST00000366998 CCDC144BQ3MJ40 725 aa16.76■□□□□ 0.27
NEK2-201ENST00000366998 EAPPQ56P03 285 aaPredicted RBP16.76■□□□□ 0.27
NEK2-201ENST00000366998 CATSPERGQ6ZRH7 1159 aa16.76■□□□□ 0.27
NEK2-201ENST00000366998 DYMQ7RTS9 669 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms