RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ARHGAP4P98171 946 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 SLC39A14Q15043 492 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 PTPAQ15257 358 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 MTFR1Q15390 333 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 UBE2Q1Q7Z7E8 422 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 ANKRD35Q8N283 1001 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 KCNG4Q8TDN1 519 aa23.45■■□□□ 1.34
SHISA4-201ENST00000362011 H0YGN5 161 aa23.44■■□□□ 1.34
SHISA4-201ENST00000362011 SPTLC2O15270 562 aa23.44■■□□□ 1.34
SHISA4-201ENST00000362011 CCNT1O60563 726 aaKnown RBP23.44■■□□□ 1.34
SHISA4-201ENST00000362011 GCFC2P16383 781 aaKnown RBP23.44■■□□□ 1.34
SHISA4-201ENST00000362011 FRMPD4Q14CM0 1322 aa23.44■■□□□ 1.34
SHISA4-201ENST00000362011 RPTORQ8N122 1335 aa23.44■■□□□ 1.34
SHISA4-201ENST00000362011 PRPF40AO75400 957 aaKnown RBP23.43■■□□□ 1.34
SHISA4-201ENST00000362011 MYCP01106 439 aaPredicted RBP23.43■■□□□ 1.34
SHISA4-201ENST00000362011 BCRP11274 1271 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 HOXD10P28358 340 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 WDR78Q5VTH9 848 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 MOXD1Q6UVY6 613 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
SHISA4-201ENST00000362011 CRYGNQ8WXF5 182 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 TAAR1Q96RJ0 339 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 MMP19Q99542 508 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 PORCNQ9H237 461 aa23.43■■□□□ 1.34
SHISA4-201ENST00000362011 MORC2Q9Y6X9 1032 aaPredicted RBP23.43■■□□□ 1.34
SHISA4-201ENST00000362011 EDIL3O43854 480 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 PPP6R2O75170 966 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 CYP3A4P08684 503 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 PPP4R3AQ6IN85 833 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 PXMP2Q9NR77 195 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 LMBRD1Q9NUN5 540 aa23.42■■□□□ 1.34
SHISA4-201ENST00000362011 NEMFO60524 1076 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 TDP2O95551 362 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 FCER1AP12319 257 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 GRK4P32298 578 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 ATP2C1P98194 919 aaPredicted RBP23.41■■□□□ 1.34
SHISA4-201ENST00000362011 PTGDRQ13258 359 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 KCTD2Q14681 263 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 RMDN3Q96TC7 470 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 DOCK5Q9H7D0 1870 aa23.41■■□□□ 1.34
SHISA4-201ENST00000362011 GJB1P08034 283 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 MARCKSP29966 332 aaPredicted RBP23.4■■□□□ 1.34
SHISA4-201ENST00000362011 CIITAP33076 1130 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 ZNF76P36508 570 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 ME1P48163 572 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 GJA8P48165 433 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 UBXN2AP68543 259 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 ARHGEF16Q5VV41 709 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 WDR81Q562E7 1941 aa23.4■■□□□ 1.34
SHISA4-201ENST00000362011 CYP3A7-CYP3A51PA0A087WV96 503 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 POTEB2H3BUK9 544 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 LAD1O00515 517 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 CYP3A7P24462 503 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 MAPK4P31152 587 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 DNERQ8NFT8 737 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 NSUN6Q8TEA1 469 aaKnown RBP23.39■■□□□ 1.34
SHISA4-201ENST00000362011 MBOAT7Q96N66 472 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 DDX25Q9UHL0 483 aaKnown RBP23.39■■□□□ 1.34
SHISA4-201ENST00000362011 IVNS1ABPQ9Y6Y0 642 aa23.39■■□□□ 1.34
SHISA4-201ENST00000362011 GOLGA6L4A6NEF3 574 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 EIF2AK2P19525 551 aaKnown RBP23.38■■□□□ 1.33
SHISA4-201ENST00000362011 PGM5Q15124 567 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 PCNX4Q63HM2 1172 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 C4orf32Q8N8J7 132 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 RAET1EQ8TD07 263 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 PURBQ96QR8 312 aaKnown RBP23.38■■□□□ 1.33
SHISA4-201ENST00000362011 PDCD2LQ9BRP1 358 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 PCDHA7Q9UN72 937 aa23.38■■□□□ 1.33
SHISA4-201ENST00000362011 STRNO43815 780 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 SLC37A4O43826 429 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 CUTAO60888 179 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 OR52Z1P0C646 297 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 UBE2HP62256 183 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 ARL6IP4Q66PJ3 421 aaKnown RBP23.37■■□□□ 1.33
SHISA4-201ENST00000362011 POTEDQ86YR6 584 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 ABRAQ8N0Z2 381 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 FAM133AQ8N9E0 248 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 KRI1Q8N9T8 703 aaKnown RBP23.37■■□□□ 1.33
SHISA4-201ENST00000362011 TMEM60Q9H2L4 133 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 ADD3Q9UEY8 706 aaKnown RBP23.37■■□□□ 1.33
SHISA4-201ENST00000362011 MRVI1Q9Y6F6 885 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 CEP290O15078 2479 aa23.37■■□□□ 1.33
SHISA4-201ENST00000362011 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 GADD45BO75293 160 aaPredicted RBP23.36■■□□□ 1.33
SHISA4-201ENST00000362011 CCL5P13501 91 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 PTPREP23469 700 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 CCND2P30279 289 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 PRPHP41219 470 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 ALDH5A1P51649 535 aaPredicted RBP23.36■■□□□ 1.33
SHISA4-201ENST00000362011 CNTN2Q02246 1040 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 PRKCZQ05513 592 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 CALCRLQ16602 461 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 Q4G0T1 1027 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 XRRA1Q6P2D8 792 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 GPR142Q7Z601 462 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 PLEKHH3Q7Z736 793 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 IL31RAQ8NI17 732 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 FERMT2Q96AC1 680 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 PRO3102Q9H379 93 aa23.36■■□□□ 1.33
SHISA4-201ENST00000362011 FBXO2Q9UK22 296 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms