RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 CAPN12Q6ZSI9 719 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 GPR101Q96P66 508 aaPredicted RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 GPR108Q9NPR9 543 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 RNF219Q5W0B1 726 aaPredicted RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ARMCX2Q7L311 632 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 FASTKD5Q7L8L6 764 aaKnown RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 EFCAB13Q8IY85 973 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 FAM49AQ9H0Q0 323 aaPredicted RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 FNDC3AQ9Y2H6 1198 aaKnown RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 SGK1O00141 431 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ERO1AQ96HE7 468 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ECE2O60344 883 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 PPFIA4O75335 1185 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 NFKBIAP25963 317 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 EPHB1P54762 984 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ANKRD20A3Q5VUR7 823 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 CDC42BPGQ6DT37 1551 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ZNF18P17022 549 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 VPS41P49754 854 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ADKP55263 362 aaKnown RBP14.13□□□□□ -0.15
NLRC3-202ENST00000359128 BBOF1Q8ND07 529 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 CCNYQ8ND76 341 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 GDAP1Q8TB36 358 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 CUEDC2Q9H467 287 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 ZNF148Q9UQR1 794 aa14.13□□□□□ -0.15
NLRC3-202ENST00000359128 KIF1BO60333 1816 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SNAP25P60880 206 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 PTPROQ16827 1216 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 TMTC4Q5T4D3 741 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 FAM114A2Q9NRY5 505 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 BZW2Q9Y6E2 419 aaKnown RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SSH2Q76I76 1423 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 CLGNO14967 610 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 DTNBO60941 627 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 ARL4AP40617 200 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 CRKP46108 304 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SYNE4Q8N205 404 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 CARD6Q9BX69 1037 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 NXF1Q9UBU9 619 aaKnown RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 MECOMQ03112 1051 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 FOXP4Q8IVH2 680 aaPredicted RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 NDUFAF2Q8N183 169 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 ATP6V1E2Q96A05 226 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SMYD2Q9NRG4 433 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 MEIS1O00470 390 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 RGS16O15492 202 aaPredicted RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SEC24BO95487 1268 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 STX2P32856 288 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 ADD2P35612 726 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 PPP2R5EQ16537 467 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 CEP120Q8N960 986 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 OR8K1Q8NGG5 319 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 HEXIM2Q96MH2 286 aaKnown RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 BSDC1Q9NW68 430 aaPredicted RBP14.12□□□□□ -0.15
NLRC3-202ENST00000359128 STK17AQ9UEE5 414 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 BAG5Q9UL15 447 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 METP08581 1390 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 BNIP3LO60238 219 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 PPARDQ03181 441 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 SEPT6Q14141 434 aa14.12□□□□□ -0.15
NLRC3-202ENST00000359128 ABCC4O15439 1325 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 PROSER3Q2NL68 480 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 HS1BP3Q53T59 392 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 AK8Q96MA6 479 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 RUNDC3BQ96NL0 473 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 HAUS8Q9BT25 410 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 PIDD1Q9HB75 910 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 PIGBQ92521 554 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 WRNIP1Q96S55 665 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 ACTN1P12814 892 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 EIF2AK2P19525 551 aaKnown RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 PPP1R2P3Q6NXS1 205 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 CCDC170Q8IYT3 715 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 MMP19Q99542 508 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 ABCF3Q9NUQ8 709 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 MOSPD1Q9UJG1 213 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 AFPP02771 609 aaKnown RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 NFX1Q12986 1120 aaKnown RBP14.11□□□□□ -0.15
NLRC3-202ENST00000359128 CATSPER4Q7RTX7 472 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 LCORLQ8N3X6 602 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 TRIML1Q8N9V2 468 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 RASGRP4Q8TDF6 673 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 DYNLL2Q96FJ2 89 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 CLIC6Q96NY7 704 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 HYOU1Q9Y4L1 999 aa14.11□□□□□ -0.15
NLRC3-202ENST00000359128 ASNSP08243 561 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms