RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 SMCR8Q8TEV9 937 aaPredicted RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 DDX12PQ92771 950 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 DRC1Q96MC2 740 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 ARHGAP20Q9P2F6 1191 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 MYH10P35580 1976 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 F8W031 263 aaPredicted RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 USO1O60763 962 aaKnown RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 PHACTR2O75167 634 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 GTF2IP78347 998 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 LRRC41Q15345 812 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 GLIS3Q8NEA6 775 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TRIM58Q8NG06 486 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TSG101Q99816 390 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 CAPN6Q9Y6Q1 641 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 LRRC53A6NM62 1247 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 EDIL3O43854 480 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TACC1O75410 805 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 ZMYND10O75800 440 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 SNHG28P0DPA3 235 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 HNRNPH3P31942 346 aaKnown RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 C2orf54Q08AI8 447 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TMEM119Q4V9L6 283 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 IQCEQ6IPM2 695 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 LRRC55Q6ZSA7 311 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 RRAGAQ7L523 313 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 CCDC84Q86UT8 332 aaPredicted RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 TANGO6Q9C0B7 1094 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 SH2D4AQ9H788 454 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 MLXIPQ9HAP2 919 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 DDX25Q9UHL0 483 aaKnown RBP9.54□□□□□ -0.88
RFX3-202ENST00000358730 PCDHA13Q9Y5I0 950 aa9.54□□□□□ -0.88
RFX3-202ENST00000358730 ABCB11O95342 1321 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 PNMA6FA0A0J9YX94 578 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 PDE2AO00408 941 aaPredicted RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 AKR1B10O60218 316 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 MARCH6O60337 910 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 TTLL1O95922 423 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 SERPINB2P05120 415 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 ATP2B2Q01814 1243 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 GABPAQ06546 454 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 ZNF543Q08ER8 600 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 PDIA5Q14554 519 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 ZSCAN26Q16670 478 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 GSPT2Q8IYD1 628 aaKnown RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 ADGRF4Q8IZF3 695 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 FNBP4Q8N3X1 1017 aaPredicted RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 GJA10Q969M2 543 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 RIC8AQ9NPQ8 531 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 MYH4Q9Y623 1939 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 ARFGEF1Q9Y6D6 1849 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 PPP1R11O60927 126 aaPredicted RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 MOCS3O95396 460 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
RFX3-202ENST00000358730 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 CUL5Q93034 780 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 JMJD4Q9H9V9 463 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 DDX4Q9NQI0 724 aaKnown RBP9.53□□□□□ -0.88
RFX3-202ENST00000358730 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 USP21Q9UK80 565 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 SNX12Q9UMY4 172 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 JRKLQ9Y4A0 524 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
RFX3-202ENST00000358730 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 BBOX1O75936 387 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 GYS1P13807 737 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 SLC16A2P36021 539 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 EHHADHQ08426 723 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 COASYQ13057 564 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 ECM1Q16610 540 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 MUM1L1Q5H9M0 696 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 PPP4R3AQ6IN85 833 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 TTBK2Q6IQ55 1244 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 MYOCDQ8IZQ8 938 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 GDAP1L1Q96MZ0 367 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 ALS2CR12Q96Q35 445 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.88
RFX3-202ENST00000358730 LTBP1Q14766 1721 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 MPHOSPH10O00566 681 aaKnown RBP9.52□□□□□ -0.89
RFX3-202ENST00000358730 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 CAPN2P17655 700 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 PSMD2Q13200 908 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 TDRD12Q587J7 1177 aaKnown RBP9.52□□□□□ -0.89
RFX3-202ENST00000358730 CCDC70Q6NSX1 233 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 CCDC155Q8N6L0 562 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 BAP1Q92560 729 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 HAS1Q92839 578 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 VIPAS39Q9H9C1 493 aa9.52□□□□□ -0.89
RFX3-202ENST00000358730 TOM1O60784 492 aa9.51□□□□□ -0.89
RFX3-202ENST00000358730 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms