RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CCND2P30279 289 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 TRIM32Q13049 653 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 PWP2Q15269 919 aaKnown RBP16.94■□□□□ 0.3
CCNE1-202ENST00000357943 STXBP2Q15833 593 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 LETM2Q2VYF4 491 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 NEK8Q86SG6 692 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
CCNE1-202ENST00000357943 MPHOSPH6Q99547 160 aaKnown RBP16.94■□□□□ 0.3
CCNE1-202ENST00000357943 B4DLN1 442 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 RGS20O76081 388 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 F13A1P00488 732 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 CYP3A4P08684 503 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 PRAMEF19Q5SWL8 479 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 FAM173BQ6P4H8 233 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 FBXO16Q8IX29 292 aaPredicted RBP16.93■□□□□ 0.3
CCNE1-202ENST00000357943 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 KATNBL1Q9H079 304 aa16.93■□□□□ 0.3
CCNE1-202ENST00000357943 FAM86B1E9PN63 330 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 EIF3JO75822 258 aaKnown RBP16.92■□□□□ 0.3
CCNE1-202ENST00000357943 TDP2O95551 362 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 FAM86B2P0C5J1 330 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 ITGB5P18084 799 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
CCNE1-202ENST00000357943 USP11P51784 963 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 NBR1Q14596 966 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 BRAPQ7Z569 592 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 ZSCAN16Q9H4T2 348 aaPredicted RBP16.92■□□□□ 0.3
CCNE1-202ENST00000357943 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 GRK4P32298 578 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 ZNF76P36508 570 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 MFSD14CQ5VZR4 134 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 XRRA1Q6P2D8 792 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
CCNE1-202ENST00000357943 SLAIN1Q8ND83 568 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 ABHD16BQ9H3Z7 469 aa16.92■□□□□ 0.3
CCNE1-202ENST00000357943 CCNT1O60563 726 aaKnown RBP16.91■□□□□ 0.3
CCNE1-202ENST00000357943 HMGCRP04035 888 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 CIITAP33076 1130 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 ACVR2BQ13705 512 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 INPP4AQ96PE3 977 aaPredicted RBP16.91■□□□□ 0.3
CCNE1-202ENST00000357943 MXRA8Q9BRK3 442 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 PDGFCQ9NRA1 345 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 MYH7BA7E2Y1 1941 aa16.91■□□□□ 0.3
CCNE1-202ENST00000357943 MCM3APO60318 1980 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 IGLV3-22A0A075B6J6 115 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 STAM2O75886 525 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 NUCB2P80303 420 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 CACNB2Q08289 660 aaPredicted RBP16.9■□□□□ 0.3
CCNE1-202ENST00000357943 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
CCNE1-202ENST00000357943 PPP4R3AQ6IN85 833 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 TAPT1Q6NXT6 567 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
CCNE1-202ENST00000357943 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 LENG9Q96B70 501 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 ZHX1Q9UKY1 873 aaPredicted RBP16.9■□□□□ 0.3
CCNE1-202ENST00000357943 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
CCNE1-202ENST00000357943 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
CCNE1-202ENST00000357943 CYP3A7-CYP3A51PA0A087WV96 503 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 MEIS1O00470 390 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 SLC37A4O43826 429 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 ZNF865P0CJ78 1059 aaPredicted RBP16.89■□□□□ 0.29
CCNE1-202ENST00000357943 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
CCNE1-202ENST00000357943 CYP3A7P24462 503 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 TRAPPC10P48553 1259 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 PRR16Q569H4 304 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 RILPL1Q5EBL4 403 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
CCNE1-202ENST00000357943 MOXD1Q6UVY6 613 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 TRPV1Q8NER1 839 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 DDX25Q9UHL0 483 aaKnown RBP16.89■□□□□ 0.29
CCNE1-202ENST00000357943 CIZ1Q9ULV3 898 aaPredicted RBP16.89■□□□□ 0.29
CCNE1-202ENST00000357943 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
CCNE1-202ENST00000357943 INHAP05111 366 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 ARP10275 920 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 CYBAP13498 195 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 ADCYAP1R1P41586 468 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 SEMA3FQ13275 785 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 MTMR1Q13613 665 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 ZNF174Q15697 407 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
CCNE1-202ENST00000357943 GNPTABQ3T906 1256 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 SLC9C1Q4G0N8 1177 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 TTC38Q5R3I4 469 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 MAP3K21Q5TCX8 1036 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 MBOAT7Q96N66 472 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 FTOQ9C0B1 505 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCNE1-202ENST00000357943 KCNH7Q9NS40 1196 aa16.88■□□□□ 0.29
CCNE1-202ENST00000357943 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.88■□□□□ 0.29
CCNE1-202ENST00000357943 ARIH2O95376 493 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms