RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 VWA3BQ502W6 1294 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 COBLL1Q53SF7 1204 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 PPP4R3AQ6IN85 833 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 TRAPPC11Q7Z392 1133 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 CTAGE6Q86UF2 777 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 CTAGE4Q8IX94 777 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 CUL5Q93034 780 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 NDST4Q9H3R1 872 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 SWAP70Q9UH65 585 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 SIK3Q9Y2K2 1263 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 MYH4Q9Y623 1939 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 NPHP3-ACAD11A0A0J9YXS1 232 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 PVALEFA0A1B0GWK0 134 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 PSMD14O00487 310 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 OAS2P29728 719 aaKnown RBP27.78■■■□□ 2.04
HDGF-201ENST00000357325 EHHADHQ08426 723 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 SMC1AQ14683 1233 aaKnown RBP27.78■■■□□ 2.04
HDGF-201ENST00000357325 BEND6Q5SZJ8 279 aaPredicted RBP27.78■■■□□ 2.04
HDGF-201ENST00000357325 TEKT1Q969V4 418 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 DNAJC19Q96DA6 116 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 P2RX7Q99572 595 aaKnown RBP27.78■■■□□ 2.04
HDGF-201ENST00000357325 ABCB6Q9NP58 842 aa27.78■■■□□ 2.04
HDGF-201ENST00000357325 E9PMD0 336 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 SSBP05455 408 aaKnown RBP eCLIP27.77■■■□□ 2.04
HDGF-201ENST00000357325 CRKP46108 304 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 GYS2P54840 703 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 RAD51AP2Q09MP3 1159 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 WHAMMP3Q1A5X7 153 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 LRRC55Q6ZSA7 311 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 NUP58Q9BVL2 599 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 MACROD2A1Z1Q3 448 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 QRICH1Q2TAL8 776 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 COL23A1Q86Y22 540 aaPredicted RBP27.77■■■□□ 2.04
HDGF-201ENST00000357325 CAPZA3Q96KX2 299 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 MMS19Q96T76 1030 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 QTRT2Q9H974 415 aaKnown RBP27.77■■■□□ 2.04
HDGF-201ENST00000357325 RAB21Q9UL25 225 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 SUGT1Q9Y2Z0 365 aa27.77■■■□□ 2.04
HDGF-201ENST00000357325 FKBP15Q5T1M5 1219 aa27.76■■■□□ 2.03
HDGF-201ENST00000357325 GUF1Q8N442 669 aaKnown RBP27.76■■■□□ 2.03
HDGF-201ENST00000357325 MTMR8Q96EF0 704 aa27.76■■■□□ 2.03
HDGF-201ENST00000357325 ARHGAP20Q9P2F6 1191 aa27.76■■■□□ 2.03
HDGF-201ENST00000357325 ERICH4A6NGS2 130 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 H3BQF6 201 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 ZNF185O15231 689 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 ATP8B1O43520 1251 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 KIF20AO95235 890 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 EEF2P13639 858 aaKnown RBP27.75■■■□□ 2.03
HDGF-201ENST00000357325 STAT3P40763 770 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 BRD3Q15059 726 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 SH3BP5LQ7L8J4 393 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 RETREG2Q8NC44 543 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 MMRN2Q9H8L6 949 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 KANSL2Q9H9L4 492 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 ZNHIT6Q9NWK9 470 aaKnown RBP27.75■■■□□ 2.03
HDGF-201ENST00000357325 ATF5Q9Y2D1 282 aaPredicted RBP27.75■■■□□ 2.03
HDGF-201ENST00000357325 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 G3V3G9 751 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 DCAF8Q5TAQ9 597 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 RAB34Q9BZG1 259 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 ZNF219Q9P2Y4 722 aaPredicted RBP27.75■■■□□ 2.03
HDGF-201ENST00000357325 PCDHA12Q9UN75 941 aa27.75■■■□□ 2.03
HDGF-201ENST00000357325 EIF3CLB5ME19 914 aaKnown RBP27.74■■■□□ 2.03
HDGF-201ENST00000357325 MARCH6O60337 910 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 HLA-DOAP06340 250 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 HSPA1LP34931 641 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 COASYQ13057 564 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 C2CD5Q86YS7 1000 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 SIAH1Q8IUQ4 282 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 EIF3CQ99613 913 aaKnown RBP27.74■■■□□ 2.03
HDGF-201ENST00000357325 ARFGEF1Q9Y6D6 1849 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 CYLC1P35663 651 aaPredicted RBP27.74■■■□□ 2.03
HDGF-201ENST00000357325 MRPL12P52815 198 aaKnown RBP27.74■■■□□ 2.03
HDGF-201ENST00000357325 KRT83P78385 493 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 TUBB2AQ13885 445 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 GPATCH4Q5T3I0 446 aaKnown RBP27.74■■■□□ 2.03
HDGF-201ENST00000357325 HHIPL2Q6UWX4 724 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 TMC4Q7Z404 712 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 TUBB2BQ9BVA1 445 aa27.74■■■□□ 2.03
HDGF-201ENST00000357325 POTEB3A0JP26 581 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 POTECB2RU33 542 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 MSL1Q68DK7 614 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 PPP1R18Q6NYC8 613 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 POTEBQ6S5H4 581 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 KIAA1024Q9UPX6 916 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 MAP2K7O14733 419 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 NPR1P16066 1061 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 PPP1R2P41236 205 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 APBA1Q02410 837 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 FAM198AQ9UFP1 575 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 PCDHA1Q9Y5I3 950 aa27.73■■■□□ 2.03
HDGF-201ENST00000357325 GREB1LQ9C091 1923 aaPredicted RBP27.73■■■□□ 2.03
HDGF-201ENST00000357325 SIPA1L1O43166 1804 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 NRXN2Q9P2S2 1712 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 A0A1W2PQJ5 194 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 LRRC53A6NM62 1247 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 SEPT2Q15019 361 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 MAN2A1Q16706 1144 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 FIGNQ5HY92 759 aa27.72■■■□□ 2.03
HDGF-201ENST00000357325 NELFCDQ8IXH7 590 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms