RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 BUB1O43683 1085 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 RNF40O75150 1001 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 LDHCP07864 332 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 KIF11P52732 1056 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 SLC7A5Q01650 507 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 GFPT1Q06210 699 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 VPS72Q15906 364 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 KCTD19Q17RG1 926 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 CENPPQ6IPU0 288 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 PRR5LQ6MZQ0 368 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 FAM196AQ6ZSG2 479 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 PURBQ96QR8 312 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 ERGIC2Q96RQ1 377 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 IFIH1Q9BYX4 1025 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 DEF6Q9H4E7 631 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 MAGEF1Q9HAY2 307 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 PCDHA13Q9Y5I0 950 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 ZC3H4Q9UPT8 1303 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 TRIM66O15016 1216 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 ADCY7P51828 1080 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 AMPD3Q01432 767 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 SPA17Q15506 151 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 ENOX2Q16206 610 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 SKIDA1Q1XH10 827 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 SHROOM1Q2M3G4 852 aaPredicted RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 HSP90B2PQ58FF3 399 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 UNC13DQ70J99 1090 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 NELFCDQ8IXH7 590 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 CCDC170Q8IYT3 715 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 RAD54LQ92698 747 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 DDX12PQ92771 950 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 LRRC1Q9BTT6 524 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 SH2D4AQ9H788 454 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 DDX4Q9NQI0 724 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 HPCAL4Q9UM19 191 aa8.08□□□□□ -1.12
PTPRR-202ENST00000342084 GOLGB1Q14789 3259 aaKnown RBP8.08□□□□□ -1.12
PTPRR-202ENST00000342084 A0A0U1RQG5 324 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 A0A1W2PQJ5 194 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ANKRD65E5RJM6 399 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 TULP2O00295 520 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 RAD21O60216 631 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 AKR1B10O60218 316 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 TOM1O60784 492 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ACTN2P35609 894 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 GGCXP38435 758 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 SLC1A4P43007 532 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 FXR2P51116 673 aaKnown RBP eCLIP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 GTF2IP78347 998 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 RASSF7Q02833 373 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 MAN2A1Q16706 1144 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 TMEM266Q2M3C6 531 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 MUM1L1Q5H9M0 696 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 TRAPPC3LQ5T215 181 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 LRRC55Q6ZSA7 311 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 KCTD1Q719H9 257 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 CREG2Q8IUH2 290 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 FAM71BQ8TC56 605 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 BAP1Q92560 729 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 MS4A14Q96JA4 679 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 CRACR2AQ9BSW2 395 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 SELENOOQ9BVL4 669 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 RIOX1Q9H6W3 641 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ZNF287Q9HBT7 754 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ZNF219Q9P2Y4 722 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 POLLQ9UGP5 575 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 SNX12Q9UMY4 172 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 LY75O60449 1722 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 EP400Q96L91 3159 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 E9PMD0 336 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 PRPF6O94906 941 aaKnown RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 STAT3P40763 770 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ARID5AQ03989 594 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 CCNI2Q6ZMN8 369 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ZNF662Q6ZS27 426 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 DNAAF5Q86Y56 855 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 ADGRF4Q8IZF3 695 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 GOLGA5Q8TBA6 731 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 MTMR8Q96EF0 704 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 JMJD4Q9H9V9 463 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 MTMR4Q9NYA4 1195 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 PSD3Q9NYI0 1048 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 DDX25Q9UHL0 483 aaKnown RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 DMGDHQ9UI17 866 aaKnown RBP8.07□□□□□ -1.12
PTPRR-202ENST00000342084 GGA1Q9UJY5 639 aa8.07□□□□□ -1.12
PTPRR-202ENST00000342084 PLAGL2Q9UPG8 496 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms