RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 TDRD3Q9H7E2 651 aaKnown RBP10.8□□□□□ -0.68
MSL3-202ENST00000337339 PANK4Q9NVE7 773 aa10.8□□□□□ -0.68
MSL3-202ENST00000337339 SCAF8Q9UPN6 1271 aaKnown RBP10.8□□□□□ -0.68
MSL3-202ENST00000337339 ITIH6Q6UXX5 1313 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 BUB1O43683 1085 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
MSL3-202ENST00000337339 APBA1Q02410 837 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 QRICH1Q2TAL8 776 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 GPBP1Q86WP2 473 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 PNMA5Q96PV4 448 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 IFIH1Q9BYX4 1025 aaKnown RBP10.79□□□□□ -0.68
MSL3-202ENST00000337339 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 BLOC1S4Q9NUP1 217 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 CAPN11Q9UMQ6 739 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 SAR1BQ9Y6B6 198 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 CLRN2A0PK11 232 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 DDTLA6NHG4 134 aaPredicted RBP10.79□□□□□ -0.68
MSL3-202ENST00000337339 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 ZBTB5O15062 677 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 CHRNA5P30532 468 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 ARHGAP25P42331 645 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 ICA1Q05084 483 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 ECM1Q16610 540 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 WDR59Q6PJI9 974 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 MYOCDQ8IZQ8 938 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 NEK11Q8NG66 645 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 PDE11AQ9HCR9 933 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 PKD2L1Q9P0L9 805 aa10.79□□□□□ -0.68
MSL3-202ENST00000337339 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 SFI1A8K8P3 1242 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 EPHB6O15197 1021 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 SRGNP10124 158 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 SHMT1P34896 483 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 GABPB1Q06547 395 aaPredicted RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 GPS2Q13227 327 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 CCDC181Q5TID7 509 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 HAUS4Q9H6D7 363 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 VPS18Q9P253 973 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 REXO2Q9Y3B8 237 aaKnown RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 AHDC1Q5TGY3 1603 aaPredicted RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 TCP10L2B9ZVM9 353 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 USO1O60763 962 aaKnown RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 TBC1D8O95759 1140 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 MYL1P05976 194 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 LMAN1P49257 510 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 VSNL1P62760 191 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 VWA3BQ502W6 1294 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 FAM26FQ5R3K3 315 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 RAD54LQ92698 747 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 FGFR1OPO95684 399 aaKnown RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 CFBP00751 764 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 ALDH1B1P30837 517 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 EIF4A3P38919 411 aaKnown RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 ZBED6P86452 979 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 GSPT2Q8IYD1 628 aaKnown RBP10.78□□□□□ -0.68
MSL3-202ENST00000337339 NLGN1Q8N2Q7 840 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 NUP58Q9BVL2 599 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 VEZTQ9HBM0 779 aa10.78□□□□□ -0.68
MSL3-202ENST00000337339 LRRC53A6NM62 1247 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 MOCS3O95396 460 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 HERVK_113P62684 666 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 RAPGEF1Q13905 1077 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 PLS1Q14651 629 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 DCAF17Q5H9S7 520 aaPredicted RBP10.77□□□□□ -0.68
MSL3-202ENST00000337339 GPATCH4Q5T3I0 446 aaKnown RBP10.77□□□□□ -0.68
MSL3-202ENST00000337339 APOBEC3HQ6NTF7 200 aaKnown RBP10.77□□□□□ -0.68
MSL3-202ENST00000337339 CCDC174Q6PII3 467 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 RSRC2Q7L4I2 434 aaKnown RBP10.77□□□□□ -0.68
MSL3-202ENST00000337339 TMC4Q7Z404 712 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 CERKQ8TCT0 537 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 SECISBP2LQ93073 1101 aaKnown RBP10.77□□□□□ -0.68
MSL3-202ENST00000337339 MMS19Q96T76 1030 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 DOCK2Q92608 1830 aa10.77□□□□□ -0.68
MSL3-202ENST00000337339 GH2P01242 217 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 MAGEA1P43355 309 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 POLR2FP61218 127 aaKnown RBP10.77□□□□□ -0.69
MSL3-202ENST00000337339 RASSF7Q02833 373 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 AOC3Q16853 763 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 ZNF507Q8TCN5 953 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 SNED1Q8TER0 1413 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 GAKO14976 1311 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 A0A1W2PQC6 194 aa10.77□□□□□ -0.69
MSL3-202ENST00000337339 F5H6K3 240 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms