RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 CNGA1P29973 690 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 ERFP50548 548 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
SEC23B-202ENST00000336714 TTC38Q5R3I4 469 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 PPP1R15BQ5SWA1 713 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 TRPM8Q7Z2W7 1104 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 EZH1Q92800 747 aaPredicted RBP12.16□□□□□ -0.46
SEC23B-202ENST00000336714 EPAS1Q99814 870 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 ROBO2Q9HCK4 1378 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
SEC23B-202ENST00000336714 ICA1Q05084 483 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 WTAPQ15007 396 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 RNF220Q5VTB9 566 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 RUFY4Q6ZNE9 571 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 MAGEC3Q8TD91 643 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 TAF4BQ92750 862 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 NDST4Q9H3R1 872 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 C2CD2Q9Y426 696 aa12.16□□□□□ -0.46
SEC23B-202ENST00000336714 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
SEC23B-202ENST00000336714 ERICH2A1L162 156 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 LRRD1A4D1F6 860 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 PRKAB2O43741 272 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 RASGRP4Q8TDF6 673 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 PACSIN1Q9BY11 444 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 TRIM4Q9C037 500 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 BABAM1Q9NWV8 329 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ANKRD33BA6NCL7 494 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 NQO1P15559 274 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 PSMD1Q99460 953 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 CORO1CQ9ULV4 474 aaPredicted RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 FOXO6A8MYZ6 492 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ORC4O43929 436 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 PYGBP11216 843 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 IFNAR1P17181 557 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 ITGA6P23229 1130 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 MEA1Q16626 185 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 NAF1Q96HR8 494 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 DDX23Q9BUQ8 820 aaKnown RBP12.15□□□□□ -0.46
SEC23B-202ENST00000336714 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 DLGAP2Q9P1A6 1054 aa12.15□□□□□ -0.46
SEC23B-202ENST00000336714 GTPBP6O43824 516 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 DEXIO95424 95 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 SRGNP10124 158 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 FCER1AP12319 257 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ITGA4P13612 1032 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 TNNC1P63316 161 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 SHISA4Q96DD7 197 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 LMCD1Q9NZU5 365 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 RPS6KL1Q9Y6S9 549 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 MST1RQ04912 1400 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 CEMIPQ8WUJ3 1361 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 EYA2O00167 538 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 KLRC1P26715 233 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 KRT2P35908 639 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 RFC5P40937 340 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 IFI35P80217 286 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 BLMHQ13867 455 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 SPIRE2Q8WWL2 714 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 RPS6KC1Q96S38 1066 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 TRIM51Q9BSJ1 452 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 UTYO14607 1347 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ZNF532Q9HCE3 1301 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 IL15P40933 162 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 LACTBP83111 547 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 ANKRD40Q6AI12 368 aa12.14□□□□□ -0.47
SEC23B-202ENST00000336714 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
SEC23B-202ENST00000336714 PDS5AQ29RF7 1337 aaKnown RBP12.13□□□□□ -0.47
SEC23B-202ENST00000336714 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 RTN3O95197 1032 aaPredicted RBP12.13□□□□□ -0.47
SEC23B-202ENST00000336714 ECEL1O95672 775 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 RAD23BP54727 409 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 ATP11AP98196 1134 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 CWF19L1Q69YN2 538 aaKnown RBP12.13□□□□□ -0.47
SEC23B-202ENST00000336714 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 SYCP3Q8IZU3 236 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
SEC23B-202ENST00000336714 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms