RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 CNOT10Q9H9A5 744 aaKnown RBP12.11□□□□□ -0.47
LRAT-201ENST00000336356 KRT13P13646 458 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 IRAK1P51617 712 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 PTPN21Q16825 1174 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 GLE1Q53GS7 698 aaKnown RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 DTHD1Q6ZMT9 781 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
LRAT-201ENST00000336356 GBP5Q96PP8 586 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 L1RE1Q9UN81 338 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 GTF2A2P52657 109 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 CRYMQ14894 314 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 APBB1IPQ7Z5R6 666 aaPredicted RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 CTNNBL1Q8WYA6 563 aaPredicted RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 TMEM88BA6NKF7 163 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 DKC1O60832 514 aaKnown RBP eCLIP12.1□□□□□ -0.47
LRAT-201ENST00000336356 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 PPP2R5EQ16537 467 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 AATFQ9NY61 560 aaKnown RBP eCLIP12.1□□□□□ -0.47
LRAT-201ENST00000336356 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 CEP104O60308 925 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 FLOT1O75955 427 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 MBD4O95243 580 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 REXO1L1PQ8IX06 675 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
LRAT-201ENST00000336356 STAG1Q8WVM7 1258 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 RAB17Q9H0T7 212 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
LRAT-201ENST00000336356 RGS16O15492 202 aaPredicted RBP12.09□□□□□ -0.47
LRAT-201ENST00000336356 ENTPD3O75355 529 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 FKBP1AP62942 108 aaKnown RBP12.09□□□□□ -0.47
LRAT-201ENST00000336356 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 CLUL1Q15846 466 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 MSANTD4Q8NCY6 345 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 PARP4Q9UKK3 1724 aaKnown RBP12.09□□□□□ -0.47
LRAT-201ENST00000336356 HHIPL2Q6UWX4 724 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 PHKBQ93100 1093 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 GGA3Q9NZ52 723 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 CCDC169A6NNP5 214 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 TAF1CQ15572 869 aaPredicted RBP12.09□□□□□ -0.47
LRAT-201ENST00000336356 TRIM68Q6AZZ1 485 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 TSC22D3Q99576 134 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 MTIF3Q9H2K0 278 aaKnown RBP12.09□□□□□ -0.47
LRAT-201ENST00000336356 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 ZMYM6O95789 1325 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 NFAT5O94916 1531 aa12.09□□□□□ -0.47
LRAT-201ENST00000336356 HEXIM1O94992 359 aaKnown RBP12.08□□□□□ -0.47
LRAT-201ENST00000336356 ARID4AP29374 1257 aaPredicted RBP12.08□□□□□ -0.47
LRAT-201ENST00000336356 SEPT2Q15019 361 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 ZNF174Q15697 407 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 DENND2CQ68D51 928 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 MIGA1Q8NAN2 632 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 FAM212AQ96EL1 285 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.47
LRAT-201ENST00000336356 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.47
LRAT-201ENST00000336356 USP17L5A8MUK1 530 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 RNASE9P60153 205 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 ARID5AQ03989 594 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 C2orf54Q08AI8 447 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 RSRC2Q7L4I2 434 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 HAUS7Q99871 368 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 H3BQF6 201 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 SUN1O94901 812 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 SCARF1Q14162 830 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 LRRC23Q53EV4 343 aaPredicted RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 ZNF589Q86UQ0 364 aaPredicted RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 EDC3Q96F86 508 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 SUDS3Q9H7L9 328 aaPredicted RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 KANSL2Q9H9L4 492 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
LRAT-201ENST00000336356 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
LRAT-201ENST00000336356 RAET1EQ8TD07 263 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms