RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 PTPREP23469 700 aa22.85■■□□□ 1.25
RNF40-201ENST00000324685 CHRNDQ07001 517 aa22.85■■□□□ 1.25
RNF40-201ENST00000324685 TTC19Q6DKK2 380 aaPredicted RBP22.85■■□□□ 1.25
RNF40-201ENST00000324685 AMNQ9BXJ7 453 aa22.85■■□□□ 1.25
RNF40-201ENST00000324685 FAM47CQ5HY64 1035 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 EPB41L5Q9HCM4 733 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 PTPRTO14522 1441 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 RFX1P22670 979 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 MSH2P43246 934 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 KPNA2P52292 529 aaKnown RBP22.84■■□□□ 1.25
RNF40-201ENST00000324685 IFT88Q13099 833 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 GPATCH4Q5T3I0 446 aaKnown RBP22.84■■□□□ 1.25
RNF40-201ENST00000324685 LRCH2Q5VUJ6 765 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 WDR62O43379 1518 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 CPP00450 1065 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 PHEXP78562 749 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 SGO2Q562F6 1265 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 ZMYM1Q5SVZ6 1142 aa22.84■■□□□ 1.25
RNF40-201ENST00000324685 GCFC2P16383 781 aaKnown RBP22.83■■□□□ 1.25
RNF40-201ENST00000324685 SESTD1Q86VW0 696 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 ATP6V0A1Q93050 837 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 ORAI2Q96SN7 254 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 MYOM2P54296 1465 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 ENC1O14682 589 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 PHKG2P15735 406 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 FAM186BQ8IYM0 893 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 HNRNPDLO14979 420 aaKnown RBP22.83■■□□□ 1.25
RNF40-201ENST00000324685 IFNAR2P48551 515 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 RCN2Q14257 317 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 JPH2Q9BR39 696 aaPredicted RBP22.83■■□□□ 1.25
RNF40-201ENST00000324685 ANGPTL3Q9Y5C1 460 aa22.83■■□□□ 1.25
RNF40-201ENST00000324685 FAM98CQ17RN3 349 aaKnown RBP22.83■■□□□ 1.24
RNF40-201ENST00000324685 ABCB5Q2M3G0 1257 aa22.83■■□□□ 1.24
RNF40-201ENST00000324685 LRRC24Q50LG9 513 aa22.83■■□□□ 1.24
RNF40-201ENST00000324685 WHAMMQ8TF30 809 aa22.83■■□□□ 1.24
RNF40-201ENST00000324685 IFRD2Q12894 506 aaPredicted RBP22.83■■□□□ 1.24
RNF40-201ENST00000324685 CCDC17Q96LX7 622 aa22.83■■□□□ 1.24
RNF40-201ENST00000324685 ORC6Q9Y5N6 252 aa22.83■■□□□ 1.24
RNF40-201ENST00000324685 KDM5AP29375 1690 aaKnown RBP22.82■■□□□ 1.24
RNF40-201ENST00000324685 TTI1O43156 1089 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 CYP4A11Q02928 519 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 SLMAPQ14BN4 828 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 RWDD2AQ9UIY3 292 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 TCP10L2B9ZVM9 353 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 SORBS3O60504 671 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 HSPA8P11142 646 aaKnown RBP22.82■■□□□ 1.24
RNF40-201ENST00000324685 PKP1Q13835 747 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 PDCD2Q16342 344 aaPredicted RBP22.82■■□□□ 1.24
RNF40-201ENST00000324685 COPRSQ9NQ92 184 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 TXLNGQ9NUQ3 528 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 MCF2LO15068 1137 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 SEC31AO94979 1220 aaKnown RBP22.82■■□□□ 1.24
RNF40-201ENST00000324685 TMEM206Q9H813 350 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 SMYD2Q9NRG4 433 aa22.82■■□□□ 1.24
RNF40-201ENST00000324685 RRP15Q9Y3B9 282 aaKnown RBP22.82■■□□□ 1.24
RNF40-201ENST00000324685 TMED2Q15363 201 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 LRRC43Q8N309 656 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 SCYL3Q8IZE3 742 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 EFHD1Q9BUP0 239 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 THAP9Q9H5L6 903 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 SEPT9Q9UHD8 586 aaPredicted RBP22.81■■□□□ 1.24
RNF40-201ENST00000324685 SYNJ2BP-COX16A0A087WUM0 186 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 KRT1P04264 644 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 COX16Q9P0S2 106 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 C4orf50Q6ZRC1 276 aa22.81■■□□□ 1.24
RNF40-201ENST00000324685 MRPL47Q9HD33 250 aaKnown RBP22.81■■□□□ 1.24
RNF40-201ENST00000324685 AP1ARQ63HQ0 302 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 EXOC8Q8IYI6 725 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 SKA2Q8WVK7 121 aaPredicted RBP22.8■■□□□ 1.24
RNF40-201ENST00000324685 ZNF577Q9BSK1 485 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
RNF40-201ENST00000324685 MX2P20592 715 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 CASP2P42575 452 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 NCAPG2Q86XI2 1143 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 MAN1B1Q9UKM7 699 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 MED7O43513 233 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 RPS6KC1Q96S38 1066 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 PLEKHG3A1L390 1219 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 C2orf54Q08AI8 447 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 SEPT2Q15019 361 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 GADL1Q6ZQY3 521 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 FLAD1Q8NFF5 587 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 WDR11Q9BZH6 1224 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 PLTPP55058 493 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 NSUN7Q8NE18 718 aaKnown RBP22.8■■□□□ 1.24
RNF40-201ENST00000324685 FAM8A1Q9UBU6 413 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 ATP8A1Q9Y2Q0 1164 aa22.8■■□□□ 1.24
RNF40-201ENST00000324685 ACTN1P12814 892 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 FBXO41Q8TF61 875 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 ACTR5Q9H9F9 607 aaPredicted RBP22.79■■□□□ 1.24
RNF40-201ENST00000324685 MAP3K15Q6ZN16 1313 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 APOA5Q6Q788 366 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 SCNN1DP51172 638 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 IL1RL1Q01638 556 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 ALS2CLQ60I27 953 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 NRBP1Q9UHY1 535 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 GNGT2O14610 69 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 TTLL7Q6ZT98 887 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 CXorf38Q8TB03 319 aa22.79■■□□□ 1.24
RNF40-201ENST00000324685 PDE8BO95263 885 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms